RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PAMP19021 973 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 DNAJB2P25686 324 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 OR1E1P30953 314 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 GRIA4P48058 902 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 RNF180Q86T96 592 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 RASAL3Q86YV0 1011 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 MYLK4Q86YV6 388 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-213ENST00000454468 NAT14Q8WUY8 206 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 NXNL1Q96CM4 212 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 DDX50Q9BQ39 737 aaKnown RBP12.16□□□□□ -0.46
SMPD4-213ENST00000454468 MLPHQ9BV36 600 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-213ENST00000454468 DCLRE1BQ9H816 532 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 COG4Q9H9E3 785 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 SAR1AQ9NR31 198 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 ZNF180Q9UJW8 692 aa12.16□□□□□ -0.46
SMPD4-213ENST00000454468 FAM95CA0A1B0GW59 222 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 MTSS1O43312 755 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 ANXA9O76027 345 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 SP100P23497 879 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 FKBP1BP68106 108 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 DSC2Q02487 901 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 DUSP4Q13115 394 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 UPP1Q16831 310 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CCNJLQ8IV13 435 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TEKT5Q96M29 485 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 KCNK13Q9HB14 408 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 NDE1Q9NXR1 346 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 AAR2Q9Y312 384 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TMEM233B4DJY2 109 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 J3KR12 359 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 DCLK1O15075 740 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 NCAM2O15394 837 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TIMM44O43615 452 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 PEX11AO75192 247 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 SUPT7LO94864 414 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 SORBS2O94875 1100 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CD68P34810 354 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 SCNN1BP51168 640 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CCL23P55773 120 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 WNT3AP56704 352 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 MAP7D1Q3KQU3 841 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 RIPOR1Q6ZS17 1223 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 KCNN1Q92952 543 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 IL22Q9GZX6 179 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 PLAC1Q9HBJ0 212 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 SSU72Q9NP77 194 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 PTCH2Q9Y6C5 1203 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 ZNF646O15015 1829 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CNTN5O94779 1100 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 GLUD2P49448 558 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 GALNT3Q14435 633 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 RPS6KA2Q15349 733 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.469e-6■■□□□ 13.3
SMPD4-213ENST00000454468 OTUD1Q5VV17 481 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 ACAD11Q709F0 780 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TMPRSS6Q8IU80 811 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CNTD1Q8N815 330 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 SCG3Q8WXD2 468 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 GBA3Q9H227 469 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 GPAMQ9HCL2 828 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TRPC7Q9HCX4 862 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 TCF7L2Q9NQB0 619 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 UTP6Q9NYH9 597 aaKnown RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 MOCS1Q9NZB8 636 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-213ENST00000454468 FETUBQ9UGM5 382 aa12.15□□□□□ -0.46
SMPD4-213ENST00000454468 A8MX80 341 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CNTFP26441 200 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 LRPAP1P30533 357 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CDH13P55290 713 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 OCRLQ01968 901 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 TAF10Q12962 218 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 NEPROQ6NW34 567 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 DCP1BQ8IZD4 617 aaKnown RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 PHTF2Q8N3S3 785 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 OR52K2Q8NGK3 314 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 PSMG2Q969U7 264 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 RBBP8Q99708 897 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 GATA5Q9BWX5 397 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 BRD8Q9H0E9 1235 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 MARCH2Q9P0N8 246 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 TRHDEQ9UKU6 1024 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CDY1Q9Y6F8 540 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 E9PAM4 449 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 AOC2O75106 756 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 DPYSQ14117 519 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 LPIN1Q14693 890 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 MAPRE1Q15691 268 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms