RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ARHGAP12Q8IWW6 846 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 HDDC3Q8N4P3 179 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 C12orf50Q8NA57 414 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 PIP4K2CQ8TBX8 421 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 TSC1Q92574 1164 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 HMCESQ96FZ2 354 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 NUP85Q9BW27 656 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 DHX35Q9H5Z1 703 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 PCDH15Q96QU1 1955 aa16.44■□□□□ 0.22
SCAMP4-205ENST00000452128 CEP192Q8TEP8 1941 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 RASA4BC9J798 803 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 PLK4O00444 970 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 FGF10O15520 208 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 RASA4O43374 803 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 LATO43561 262 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 PRPSAP2O60256 369 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 GJB3O75712 270 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 IL1BP01584 269 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 IL4RP24394 825 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 ADPRHP54922 357 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 AASDHQ4L235 1098 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 KIAA0895LQ68EN5 471 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 IL31Q6EBC2 164 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 NCEH1Q6PIU2 408 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 RFX8Q6ZV50 586 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 PCDH20Q8N6Y1 951 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 OR2T34Q8NGX1 318 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 TEKT4Q8WW24 435 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 TNKS2Q9H2K2 1166 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 CATSPERBQ9H7T0 1116 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 NHEJ1Q9H9Q4 299 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 PDFQ9HBH1 243 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 FSCN3Q9NQT6 498 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 IP6K2Q9UHH9 426 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 EIF2B4Q9UI10 523 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 NCKAP1Q9Y2A7 1128 aa16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 FCF1Q9Y324 198 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-205ENST00000452128 ASCC3Q8N3C0 2202 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 AKR1B15C9JRZ8 316 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 SLC7A4O43246 635 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 RNASEH2AO75792 299 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 RARAP10276 462 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 ENGP17813 658 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 ERCC2P18074 760 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 CCR5P51681 352 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 ZNF75DP51815 510 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 ZNF135P52742 658 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 NDST2P52849 883 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 CNTN1Q12860 1018 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 SFSWAPQ12872 951 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 TCEAL1Q15170 157 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 PARP15Q460N3 678 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 INO80DQ53TQ3 878 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 CARD16Q5EG05 197 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 PIP5KL1Q5T9C9 394 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 FAM46CQ5VWP2 391 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 RABEPKQ7Z6M1 372 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 DSG4Q86SJ6 1040 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 ARRDC3Q96B67 414 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 EDEM2Q9BV94 578 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 SLC39A8Q9C0K1 460 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 KDM4CQ9H3R0 1056 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 UVRAGQ9P2Y5 699 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 ANAPC7Q9UJX3 599 aa16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 CDV3Q9UKY7 258 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-205ENST00000452128 A0A1B0GTW7 788 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 C4orf47A7E2U8 309 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 MYO1FO00160 1098 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 EEF2KO00418 725 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 BCAT2O15382 392 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 PLRG1O43660 514 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 MTA2O94776 668 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 H2AFZP0C0S5 128 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 TMEM253P0C7T8 217 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 FECHP22830 423 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 CD27P26842 260 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 TPI1P60174 286 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 CYTH1Q15438 398 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 ARSIQ5FYB1 569 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 H2AFVQ71UI9 128 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 ERMP1Q7Z2K6 904 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 TP53INP2Q8IXH6 220 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 NPWQ8N729 165 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 MRFAP1L1Q96HT8 127 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 OMDQ99983 421 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 HDAC8Q9BY41 377 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 SUSD2Q9UGT4 822 aa16.41■□□□□ 0.22
SCAMP4-205ENST00000452128 A0A1W2PPC4 97 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 WNT9AO14904 365 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 PRAMEF11O60813 436 aa16.4■□□□□ 0.22
SCAMP4-205ENST00000452128 LEFTY1O75610 366 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms