RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 LATS1O95835 1130 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SRPRAP08240 638 aaKnown RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 HMBSP08397 361 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SLFN14P0C7P3 912 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 FDPSP14324 419 aaKnown RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 GARTP22102 1010 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 PRPHP41219 470 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 RECQLP46063 649 aaPredicted RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 COPB1P53618 953 aaKnown RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 MAPK10P53779 464 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 MAP3K7CLP57077 242 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SURF1Q15526 300 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 ZRSR1Q15695 479 aaKnown RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 WDR72Q3MJ13 1102 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 BMP2KLQ5H9B9 411 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SAMD5Q5TGI4 173 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 AGBL4Q5VU57 503 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 FAM46CQ5VWP2 391 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 NEK5Q6P3R8 708 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SPNS3Q6ZMD2 512 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SLCO4C1Q6ZQN7 724 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC186Q7Z3E2 898 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 GPBP1Q86WP2 473 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC13Q8IYE1 715 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 C4orf32Q8N8J7 132 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 BTN2A2Q8WVV5 523 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 TMA16Q96EY4 203 aaKnown RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 BTBD6Q96KE9 485 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 FAM84AQ96KN4 292 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 TBATAQ96M53 351 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 C5orf34Q96MH7 638 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SPAG5Q96R06 1193 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 FAM129BQ96TA1 746 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 CGRRF1Q99675 332 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SMOQ99835 787 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 MYOCQ99972 504 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 EFHD1Q9BUP0 239 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 AKAP7Q9P0M2 348 aaPredicted RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 ERRFI1Q9UJM3 462 aaPredicted RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 MKL2Q9ULH7 1088 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 PADI4Q9UM07 663 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 EXOC7Q9UPT5 735 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 TACC2O95359 2948 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 SPTY2D1-AS1A0A0U1RR47 76 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 SLC31A1O15431 190 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 BEST1O76090 585 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 RPLP0P05388 317 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 FAM200BP0CF97 657 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 EPXP11678 715 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 PRLRP16471 622 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 ADH6P28332 368 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 CD70P32970 193 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 DDIT3P35638 169 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 ETV5P41161 510 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 MC1RQ01726 317 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 EFEMP1Q12805 493 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 FZD2Q14332 565 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 EIF2S3LQ2VIR3 472 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 ZNF542PQ5EBM4 170 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 KYAT3Q6YP21 454 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 GCNT7Q6ZNI0 430 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 ASB18Q6ZVZ8 466 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 PTAR1Q7Z6K3 402 aaPredicted RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 WDR49Q8IV35 697 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 MCEMP1Q8IX19 187 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 STK40Q8N2I9 435 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 OR5B17Q8NGF7 314 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 LMX1AQ8TE12 382 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 SCG3Q8WXD2 468 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 JPH3Q8WXH2 748 aaPredicted RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 TCTN2Q96GX1 697 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 PPP1R13BQ96KQ4 1090 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 MRGPRX3Q96LB0 322 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 CPEB1Q9BZB8 566 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 UNKQ9C0B0 810 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 PHACTR1Q9C0D0 580 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 INTS2Q9H0H0 1204 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 ZHX3Q9H4I2 956 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 MARCH2Q9P0N8 246 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 SPASTQ9UBP0 616 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 STOML2Q9UJZ1 356 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 PPM1HQ9ULR3 514 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
LINC01961-201ENST00000449954 SLC5A6Q9Y289 635 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 KCTD3Q9Y597 815 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 SDK2Q58EX2 2172 aa8.12□□□□□ -1.11
LINC01961-201ENST00000449954 SHANK1Q9Y566 2161 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 ARHGAP10A1A4S6 786 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 TTC34A8MYJ7 566 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 LMO7DNF2Z398 122 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 KIAA0391O15091 583 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 CASC3O15234 703 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 DIAPH2O60879 1101 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 C4BPAP04003 597 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 KRT18P05783 430 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 PRKAR1AP10644 381 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms