RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 PPP6R3Q5H9R7 873 aaPredicted RBP17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 PPP1R15BQ5SWA1 713 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 PCDH20Q8N6Y1 951 aaKnown RBP17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 SLC6A18Q96N87 628 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 MAGEB5Q9BZ81 275 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 CEP44Q9C0F1 390 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 LAMA1P25391 3075 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 PCDH15Q96QU1 1955 aa17.11■□□□□ 0.33
TSPAN9-204ENST00000444315 TP53BP1Q12888 1972 aaPredicted RBP17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 SLC7A4O43246 635 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 PCDH8O95206 1070 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 CASP14P31944 242 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 SNRPD1P62314 119 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 OGDHQ02218 1023 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 TRIM14Q14142 442 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 MANEALQ5VSG8 457 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 PLEKHA7Q6IQ23 1121 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 LAYNQ6UX15 382 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 CHST14Q8NCH0 376 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 ARHGEF2Q92974 986 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 NCAPGQ9BPX3 1015 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 NDFIP2Q9NV92 336 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 SARDHQ9UL12 918 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 TPX2Q9ULW0 747 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 ANKRD6Q9Y2G4 727 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 SPTBN2O15020 2390 aa17.1■□□□□ 0.33
TSPAN9-204ENST00000444315 A0A1W2PPC4 97 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 TCRBV5S1A1TA0A578 114 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 ZSCAN5CA6NGD5 496 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 KRIT1O00522 736 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 NEMP1O14524 444 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 GIPC1O14908 333 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 ADRB1P08588 477 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 CEACAM1P13688 526 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 CSRP1P21291 193 aaKnown RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 DRD3P35462 400 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 GRIA4P48058 902 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 CCR5P51681 352 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 CCNHP51946 323 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 METAP1P53582 386 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 ARF5P84085 180 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 RAD51Q06609 339 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 FOXC1Q12948 553 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 HLA-BQ31612 363 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 SETMARQ53H47 684 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 CARD16Q5EG05 197 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 CCDC122Q5T0U0 273 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 ERMARDQ5T6L9 678 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 N4BP2L1Q5TBK1 243 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 DPY19L3Q6ZPD9 716 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 NLRP14Q86W24 1093 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 OR6K2Q8NGY2 324 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 HEPHQ9BQS7 1158 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 SYT11Q9BT88 431 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 HECAQ9UBI9 543 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 PPM1HQ9ULR3 514 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 ASCC3Q8N3C0 2202 aaKnown RBP17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 DNAH14Q0VDD8 3507 aa17.09■□□□□ 0.33
TSPAN9-204ENST00000444315 TMEM191CA6NGB0 347 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 RASA4BC9J798 803 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 RASA4O43374 803 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 PLRG1O43660 514 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 RNGTTO60942 597 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 LEFTY1O75610 366 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 IGSF6O95976 241 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 IGHV4-34P06331 123 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 HTR7P34969 479 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 RHOAP61586 193 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 PPP2CBP62714 309 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 RACK1P63244 317 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 PPP2CAP67775 309 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 SUZ12Q15022 739 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 INAVAQ3KP66 663 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 PARP15Q460N3 678 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 CFAP58Q5T655 872 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 SPECC1LQ69YQ0 1117 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 NAXDQ8IW45 347 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 TMIEQ8NEW7 156 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 HSPH1Q92598 858 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 MYOCQ99972 504 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 ANP32EQ9BTT0 268 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 SNRNP25Q9BV90 132 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 KDM4CQ9H3R0 1056 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 ZWILCHQ9H900 591 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 PREBQ9HCU5 417 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 TM7SF3Q9NS93 570 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 DNAAF2Q9NVR5 837 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 ANAPC7Q9UJX3 599 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 SNX11Q9Y5W9 270 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 ACTL7AQ9Y615 435 aa17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 CNOT1A5YKK6 2376 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-204ENST00000444315 TMEM131Q92545 1883 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms