RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TBC1D3HP0C7X1 549 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 CSRP1P21291 193 aaKnown RBP21.49■■□□□ 1.03
CDKN3-204ENST00000442975 TPI1P60174 286 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 BNC1Q01954 994 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 SEMA3BQ13214 749 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 AGBL4Q5VU57 503 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 TBC1D3GQ6DHY5 549 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 TBC1D3CQ6IPX1 549 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 IL27RAQ6UWB1 636 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 DPY19L3Q6ZPD9 716 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 TBC1D3Q8IZP1 549 aaPredicted RBP21.49■■□□□ 1.03
CDKN3-204ENST00000442975 RYBPQ8N488 228 aaPredicted RBP21.49■■□□□ 1.03
CDKN3-204ENST00000442975 MAGEH1Q9H213 219 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 DHX35Q9H5Z1 703 aaKnown RBP21.49■■□□□ 1.03
CDKN3-204ENST00000442975 RETREG1Q9H6L5 497 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 GAREM1Q9H706 876 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 CATSPERBQ9H7T0 1116 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 IL21RQ9HBE5 538 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 AASDHPPTQ9NRN7 309 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 DNAAF2Q9NVR5 837 aaKnown RBP21.49■■□□□ 1.03
CDKN3-204ENST00000442975 IL36AQ9UHA7 158 aa21.49■■□□□ 1.03
CDKN3-204ENST00000442975 BZW2Q9Y6E2 419 aaKnown RBP21.49■■□□□ 1.03
CDKN3-204ENST00000442975 CNOT1A5YKK6 2376 aaKnown RBP21.48■■□□□ 1.03
CDKN3-204ENST00000442975 A0A1W2PPC4 97 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 RNF8O76064 485 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 GRIA4P48058 902 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 GEMIN4P57678 1058 aaKnown RBP21.48■■□□□ 1.03
CDKN3-204ENST00000442975 SLC20A2Q08357 652 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 NUMA1Q14980 2115 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 NFKBIBQ15653 356 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 KIF19Q2TAC6 998 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 PCDH20Q8N6Y1 951 aaKnown RBP21.48■■□□□ 1.03
CDKN3-204ENST00000442975 OR6K2Q8NGY2 324 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 PEBP4Q96S96 227 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 ORAI3Q9BRQ5 295 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 MRPL47Q9HD33 250 aaKnown RBP21.48■■□□□ 1.03
CDKN3-204ENST00000442975 OSGEPQ9NPF4 335 aa21.48■■□□□ 1.03
CDKN3-204ENST00000442975 FNDC3AQ9Y2H6 1198 aaKnown RBP21.48■■□□□ 1.03
CDKN3-204ENST00000442975 FGF10O15520 208 aaPredicted RBP21.47■■□□□ 1.03
CDKN3-204ENST00000442975 PLRG1O43660 514 aaKnown RBP21.47■■□□□ 1.03
CDKN3-204ENST00000442975 PRPSAP2O60256 369 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 CEACAM1P13688 526 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 MAT2AP31153 395 aaKnown RBP21.47■■□□□ 1.03
CDKN3-204ENST00000442975 CASP14P31944 242 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 CCR5P51681 352 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 CCNHP51946 323 aaPredicted RBP21.47■■□□□ 1.03
CDKN3-204ENST00000442975 C21orf59P57076 290 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 RACK1P63244 317 aaKnown RBP21.47■■□□□ 1.03
CDKN3-204ENST00000442975 HLA-BQ31612 363 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 ARSIQ5FYB1 569 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 FNIP1Q8TF40 1166 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 ARRDC3Q96B67 414 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 HMCESQ96FZ2 354 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 PPP1R16AQ96I34 528 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 SERAC1Q96JX3 654 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 SNRNP25Q9BV90 132 aaKnown RBP21.47■■□□□ 1.03
CDKN3-204ENST00000442975 ZDHHC6Q9H6R6 413 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 EBF2Q9HAK2 575 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 ANKRD6Q9Y2G4 727 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 SNX11Q9Y5W9 270 aa21.47■■□□□ 1.03
CDKN3-204ENST00000442975 EEF2KO00418 725 aaKnown RBP21.46■■□□□ 1.03
CDKN3-204ENST00000442975 CBFA2T2O43439 604 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 BUB1O43683 1085 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 ZNF821O75541 412 aaPredicted RBP21.46■■□□□ 1.03
CDKN3-204ENST00000442975 LEFTY1O75610 366 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 CD59P13987 128 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 MIPP30301 263 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 CA9Q16790 459 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 CARD16Q5EG05 197 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 PIP5KL1Q5T9C9 394 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 TMIEQ8NEW7 156 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 FAM131CQ96AQ9 280 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 ISCUQ9H1K1 167 aa21.46■■□□□ 1.03
CDKN3-204ENST00000442975 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.46■■□□□ 1.03
CDKN3-204ENST00000442975 SPAARA0A1B0GVQ0 90 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 RNF103O00237 685 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 LRCH4O75427 683 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 GJB3O75712 270 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 CD160O95971 181 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 PARP15Q460N3 678 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 PPP6R3Q5H9R7 873 aaPredicted RBP21.45■■□□□ 1.02
CDKN3-204ENST00000442975 PIP4P1Q86T03 277 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 NAXDQ8IW45 347 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 ARFGAP1Q8N6T3 406 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 CAMK1GQ96NX5 476 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 KCTD15Q96SI1 283 aaPredicted RBP21.45■■□□□ 1.02
CDKN3-204ENST00000442975 HEPHQ9BQS7 1158 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 THAP2Q9H0W7 228 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 KDM4CQ9H3R0 1056 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 NOL6Q9H6R4 1146 aaKnown RBP21.45■■□□□ 1.02
CDKN3-204ENST00000442975 TPX2Q9ULW0 747 aaKnown RBP21.45■■□□□ 1.02
CDKN3-204ENST00000442975 WASF2Q9Y6W5 498 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 CEP192Q8TEP8 1941 aa21.45■■□□□ 1.02
CDKN3-204ENST00000442975 NYNRINQ9P2P1 1898 aaKnown RBP21.44■■□□□ 1.02
CDKN3-204ENST00000442975 A0A087X0T9 212 aa21.44■■□□□ 1.02
CDKN3-204ENST00000442975 ZSCAN5CA6NGD5 496 aaPredicted RBP21.44■■□□□ 1.02
CDKN3-204ENST00000442975 UPK3BL1B0FP48 263 aa21.44■■□□□ 1.02
CDKN3-204ENST00000442975 RASA4BC9J798 803 aa21.44■■□□□ 1.02
CDKN3-204ENST00000442975 UPK3BL2E5RIL1 263 aa21.44■■□□□ 1.02
CDKN3-204ENST00000442975 DAPK3O43293 454 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms