RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 HPCAL4Q9UM19 191 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.13■■□□□ 1.45
VARS-217ENST00000440048 FCF1Q9Y324 198 aaKnown RBP24.13■■□□□ 1.45
VARS-217ENST00000440048 PCDH15Q96QU1 1955 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 CXorf51AA0A1B0GTR3 108 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 FAM47DPA6NHR8 397 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 C1QTNF3-AMACRE9PGA6 284 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 PLK4O00444 970 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 KDELR3O43731 214 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 CTSLP07711 333 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 GNSP15586 552 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 TCF4P15884 667 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 IL1R2P27930 398 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 CHRNA3P32297 505 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 YBEYP58557 167 aaPredicted RBP24.12■■□□□ 1.45
VARS-217ENST00000440048 UMODL1-AS1Q8N2C9 162 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 ZCCHC9Q8N567 271 aaKnown RBP24.12■■□□□ 1.45
VARS-217ENST00000440048 PCDH20Q8N6Y1 951 aaKnown RBP24.12■■□□□ 1.45
VARS-217ENST00000440048 NIPA2Q8N8Q9 360 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 CHST14Q8NCH0 376 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 SNX19Q92543 992 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 BIRC7Q96CA5 298 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 PACSIN1Q9BY11 444 aa24.12■■□□□ 1.45
VARS-217ENST00000440048 RASA4BC9J798 803 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 AKR1B15C9JRZ8 316 aaPredicted RBP24.11■■□□□ 1.45
VARS-217ENST00000440048 CDX4O14627 284 aaPredicted RBP24.11■■□□□ 1.45
VARS-217ENST00000440048 RASA4O43374 803 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 AKR1B10O60218 316 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 FSBPO95073 299 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 ENGP17813 658 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 RECQLP46063 649 aaPredicted RBP24.11■■□□□ 1.45
VARS-217ENST00000440048 GEMIN4P57678 1058 aaKnown RBP24.11■■□□□ 1.45
VARS-217ENST00000440048 POM121L1PQ3SYA9 428 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 PPP6R3Q5H9R7 873 aaPredicted RBP24.11■■□□□ 1.45
VARS-217ENST00000440048 KIAA0895LQ68EN5 471 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 NCEH1Q6PIU2 408 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.11■■□□□ 1.45
VARS-217ENST00000440048 LEKR1Q6ZMV7 388 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 DPY19L3Q6ZPD9 716 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 CNGA4Q8IV77 575 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 OR2T34Q8NGX1 318 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 C1orf216Q8TAB5 229 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 FAM131CQ96AQ9 280 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 HMCESQ96FZ2 354 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 KLC2Q9H0B6 622 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 TMEM9BQ9NQ34 198 aa24.11■■□□□ 1.45
VARS-217ENST00000440048 A0A1B0GTW7 788 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 DCDC2BA2VCK2 349 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 LRRC72A6NJI9 287 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 C4orf47A7E2U8 309 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 MYO1FO00160 1098 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 DNA2P51530 1060 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 ADPRHP54922 357 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 CNTN1Q12860 1018 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 PARP15Q460N3 678 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 BOLA3Q53S33 107 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 KCNT1Q5JUK3 1230 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 RFX8Q6ZV50 586 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 GAS2L3Q86XJ1 694 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 ZNF354CQ86Y25 554 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 TMIEQ8NEW7 156 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 OR14C36Q8NHC7 312 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 ZNF564Q8TBZ8 553 aaPredicted RBP24.1■■□□□ 1.45
VARS-217ENST00000440048 CTNNBL1Q8WYA6 563 aaPredicted RBP24.1■■□□□ 1.45
VARS-217ENST00000440048 ISG20Q96AZ6 181 aaKnown RBP24.1■■□□□ 1.45
VARS-217ENST00000440048 NHEJ1Q9H9Q4 299 aaPredicted RBP24.1■■□□□ 1.45
VARS-217ENST00000440048 DONSONQ9NYP3 566 aa24.1■■□□□ 1.45
VARS-217ENST00000440048 ASCC3Q8N3C0 2202 aaKnown RBP24.1■■□□□ 1.45
VARS-217ENST00000440048 TPRP12270 2363 aaKnown RBP24.09■■□□□ 1.45
VARS-217ENST00000440048 KNL1Q8NG31 2342 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 ZSCAN5CA6NGD5 496 aaPredicted RBP24.09■■□□□ 1.45
VARS-217ENST00000440048 RNF103O00237 685 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 BCAT2O15382 392 aaPredicted RBP24.09■■□□□ 1.45
VARS-217ENST00000440048 DAPK3O43293 454 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 PRNPP04156 253 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 IGHV4-34P06331 123 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 H2AFZP0C0S5 128 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 SERINC3Q13530 473 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 SMTNL2Q2TAL5 461 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 CARD16Q5EG05 197 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 ARSIQ5FYB1 569 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 H2AFVQ71UI9 128 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 CCDC42Q96M95 316 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 LRRC19Q9H756 370 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 ZWILCHQ9H900 591 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 SPTLC3Q9NUV7 552 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 CWC15Q9P013 229 aaKnown RBP24.09■■□□□ 1.45
VARS-217ENST00000440048 CTTNBP2NLQ9P2B4 639 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 UVRAGQ9P2Y5 699 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 IL36AQ9UHA7 158 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 SLCO1B1Q9Y6L6 691 aa24.09■■□□□ 1.45
VARS-217ENST00000440048 MED19A0JLT2 244 aaPredicted RBP24.08■■□□□ 1.45
VARS-217ENST00000440048 C10orf142B7Z368 130 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 KPNA3O00505 521 aaPredicted RBP24.08■■□□□ 1.45
VARS-217ENST00000440048 TM4SF5O14894 197 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 SLC7A4O43246 635 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 BUB1O43683 1085 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 ERCC2P18074 760 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 MAPK8P45983 427 aa24.08■■□□□ 1.45
VARS-217ENST00000440048 HCAR3P49019 387 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms