RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RNF103O00237 685 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 KPNA3O00505 521 aaPredicted RBP20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 PRNPP04156 253 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 ATP1A3P13637 1013 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 MAT2AP31153 395 aaKnown RBP20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 TYRO3Q06418 890 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 FAM72AQ5TYM5 149 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 FAM72DQ6L9T8 149 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 RETSATQ6NUM9 610 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 MON1BQ7L1V2 547 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 IQCHQ86VS3 1027 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 NLRP14Q86W24 1093 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 FAM72BQ86X60 149 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 AOPEPQ8N6M6 819 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 C3orf20Q8ND61 904 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 ARRDC3Q96B67 414 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 MAGEB5Q9BZ81 275 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 CEP44Q9C0F1 390 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 ATP13A1Q9HD20 1204 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 GDF3Q9NR23 364 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 CXorf51AA0A1B0GTR3 108 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 TCRBV5S1A1TA0A578 114 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 TNFSF14O43557 240 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 CALB1P05937 261 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 RHOQP17081 205 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 SERPINH1P50454 418 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 ARF5P84085 180 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 SLC45A4Q5BKX6 768 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 NEK5Q6P3R8 708 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 WDR59Q6PJI9 974 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 CCNI2Q6ZMN8 369 aaPredicted RBP20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 DPY19L3Q6ZPD9 716 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 SAP25Q8TEE9 199 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 FAM172AQ8WUF8 416 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 AGPAT1Q99943 283 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 ERVMER34-1Q9H9K5 563 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 NDFIP2Q9NV92 336 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 TMEM63CQ9P1W3 806 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 FREM2Q5SZK8 3169 aa20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 TP53BP1Q12888 1972 aaPredicted RBP20.74■□□□□ 0.91
NCKIPSD-206ENST00000439518 SIGLEC16A6NMB1 481 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 LRIG2O94898 1065 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 CD160O95971 181 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 CAPNS1P04632 268 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 PLEKP08567 350 aaPredicted RBP20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 ACVRL1P37023 503 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 CCDC15Q0P6D6 951 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 OVGP1Q12889 678 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 INAVAQ3KP66 663 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 SETMARQ53H47 684 aaPredicted RBP20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 ARSIQ5FYB1 569 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 SPATS2Q86XZ4 545 aaKnown RBP20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 GATAD2AQ86YP4 633 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 PCDH20Q8N6Y1 951 aaKnown RBP20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 CCDC185Q8N715 623 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 ZCCHC14Q8WYQ9 949 aaKnown RBP20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 NTAN1Q96AB6 310 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 HDAC8Q9BY41 377 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 TMEM248Q9NWD8 314 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 IL36AQ9UHA7 158 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 WASF2Q9Y6W5 498 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 DOCK9Q9BZ29 2069 aa20.73■□□□□ 0.91
NCKIPSD-206ENST00000439518 PRAMEF26H0Y7S4 382 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 YKT6O15498 198 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 RNGTTO60942 597 aaKnown RBP20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 LEFTY1O75610 366 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 GPD1P21695 349 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 ETFBP38117 255 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 RECQLP46063 649 aaPredicted RBP20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 RXRGP48443 463 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 MAPKAPK2P49137 400 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 SCAPQ12770 1279 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 ZNF284Q2VY69 593 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 RWDD4Q6NW29 188 aaKnown RBP20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 ERN2Q76MJ5 926 aaKnown RBP20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 GRIN3AQ8TCU5 1115 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 SELENOOQ9BVL4 669 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 ACTL7AQ9Y615 435 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 DSPP15924 2871 aaKnown RBP20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 CHD5Q8TDI0 1954 aa20.72■□□□□ 0.91
NCKIPSD-206ENST00000439518 A0A1W2PQU0 124 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 FERP16591 822 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 EPHA8P29322 1005 aaPredicted RBP20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 ARRB1P49407 418 aaPredicted RBP20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 STAT4Q14765 748 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 CARD16Q5EG05 197 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 PPP1R15BQ5SWA1 713 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 TMPRSS7Q7RTY8 843 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 IRF2BP2Q7Z5L9 587 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 HORMAD1Q86X24 394 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 PLPP6Q8IY26 295 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 OXR1Q8N573 874 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 TMEM145Q8NBT3 493 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 ARHGEF2Q92974 986 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 ISG20Q96AZ6 181 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 TBC1D31Q96DN5 1066 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 BPIFA3Q9BQP9 254 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 SYT11Q9BT88 431 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 MAGEH1Q9H213 219 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms