RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 OR14C36Q8NHC7 312 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 ISG20Q96AZ6 181 aaKnown RBP25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 SNRNP25Q9BV90 132 aaKnown RBP25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 GTPBP2Q9BX10 602 aaKnown RBP25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 KDM4CQ9H3R0 1056 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 DEF6Q9H4E7 631 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 GPATCH2LQ9NWQ4 482 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 SARDHQ9UL12 918 aa25.24■■□□□ 1.63
RAPGEF1-206ENST00000438647 CACNA1AO00555 2505 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 SSU72P8A0A1W2PR75 194 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 CYP1A2P05177 515 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 EIF4A3P38919 411 aaKnown RBP25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 FAM131CQ96AQ9 280 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 PEBP4Q96S96 227 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 NUP85Q9BW27 656 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 TNKS2Q9H2K2 1166 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 OSGEPQ9NPF4 335 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 DYRK4Q9NR20 520 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 ABHD10Q9NUJ1 306 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 ANAPC7Q9UJX3 599 aa25.23■■□□□ 1.63
RAPGEF1-206ENST00000438647 CHD5Q8TDI0 1954 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 CACNA1EQ15878 2313 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 EEF2KO00418 725 aaKnown RBP25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 TM4SF5O14894 197 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 KDELR3O43731 214 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 AFF3P51826 1226 aaKnown RBP25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 SLC18A3Q16572 532 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 SARM1Q6SZW1 724 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 DPY19L3Q6ZPD9 716 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 UMODL1-AS1Q8N2C9 162 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 C1orf216Q8TAB5 229 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 PPP1R16AQ96I34 528 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 IL36AQ9UHA7 158 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 IP6K2Q9UHH9 426 aa25.22■■□□□ 1.63
RAPGEF1-206ENST00000438647 KPNA3O00505 521 aaPredicted RBP25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 DAPK3O43293 454 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 MFAP3LO75121 409 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 DNA2P51530 1060 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 CCR5P51681 352 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 MAPK8IP2Q13387 824 aaPredicted RBP25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 TEAD4Q15561 434 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 UAP1L1Q3KQV9 507 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 BOLA3Q53S33 107 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 CARD16Q5EG05 197 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 CNGA4Q8IV77 575 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 PLPP6Q8IY26 295 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 MINDY1Q8N5J2 469 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 NIPA2Q8N8Q9 360 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 CASKIN2Q8WXE0 1202 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 TRIM5Q9C035 493 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 NOL6Q9H6R4 1146 aaKnown RBP25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 FSCN3Q9NQT6 498 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 NENFQ9UMX5 172 aa25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 FCF1Q9Y324 198 aaKnown RBP25.21■■□□□ 1.63
RAPGEF1-206ENST00000438647 TBC1D3DA0A087WVF3 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3IA0A087WXS9 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3EA0A087X179 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3KA0A087X1G2 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3FA6NER0 549 aaPredicted RBP25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3LB9A6J9 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 RASA4BC9J798 803 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 MYO1FO00160 1098 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 RASA4O43374 803 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 BUB1O43683 1085 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 OPHN1O60890 802 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 ZNF821O75541 412 aaPredicted RBP25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 IGHV4-34P06331 123 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 CTSLP07711 333 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3HP0C7X1 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 NDST2P52849 883 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 METAP1P53582 386 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 CNTN1Q12860 1018 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 GRIK2Q13002 908 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 CA9Q16790 459 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 POM121L1PQ3SYA9 428 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 PPP6R3Q5H9R7 873 aaPredicted RBP25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3GQ6DHY5 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3CQ6IPX1 549 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 IL27RAQ6UWB1 636 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 RFX8Q6ZV50 586 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 TBC1D3Q8IZP1 549 aaPredicted RBP25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 CHST14Q8NCH0 376 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 GRIN3AQ8TCU5 1115 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 CTNNBL1Q8WYA6 563 aaPredicted RBP25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 KCTD15Q96SI1 283 aaPredicted RBP25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 HEPHQ9BQS7 1158 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 ZWILCHQ9H900 591 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 PCDH15Q96QU1 1955 aa25.2■■□□□ 1.62
RAPGEF1-206ENST00000438647 A0A1W2PPC4 97 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 PLRG1O43660 514 aaKnown RBP25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 AKR1B10O60218 316 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 CD160O95971 181 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 GRIA4P48058 902 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 CCNHP51946 323 aaPredicted RBP25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 ARSIQ5FYB1 569 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 PPM1JQ5JR12 505 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 AGBL4Q5VU57 503 aa25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 CYP4V2Q6ZWL3 525 aaPredicted RBP25.19■■□□□ 1.62
RAPGEF1-206ENST00000438647 ARHGEF26Q96DR7 871 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms