RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 NCDNQ9UBB6 729 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 SALL4Q9UJQ4 1053 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 TFR2Q9UP52 801 aa18.73■□□□□ 0.59
HLA-F-220ENST00000434407 DOCK9Q9BZ29 2069 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 SPTBN4Q9H254 2564 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 BCLAF3A2AJT9 711 aaKnown RBP18.72■□□□□ 0.59
HLA-F-220ENST00000434407 ARHGAP42A6NI28 874 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 TMEM110-MUSTN1A8MSY1 372 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 C10orf142B7Z368 130 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 PJA2O43164 708 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 PRAMEF11O60813 436 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 CD48P09326 243 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 C5AR1P21730 350 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 SLC8A1P32418 973 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 RPL6Q02878 288 aaKnown RBP18.72■□□□□ 0.59
HLA-F-220ENST00000434407 PLA2G2CQ5R387 149 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 DSG4Q86SJ6 1040 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 VSIG1Q86XK7 387 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 TMEFF1Q8IYR6 380 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 DCLK2Q8N568 766 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 TMIEQ8NEW7 156 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 CELF6Q96J87 481 aaKnown RBP18.72■□□□□ 0.59
HLA-F-220ENST00000434407 CCDC114Q96M63 670 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 ZNF670Q9BS34 389 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 PCED1AQ9H1Q7 454 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 SARDHQ9UL12 918 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 FCF1Q9Y324 198 aaKnown RBP18.72■□□□□ 0.59
HLA-F-220ENST00000434407 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
HLA-F-220ENST00000434407 FARP1Q9Y4F1 1045 aaPredicted RBP18.72■□□□□ 0.59
HLA-F-220ENST00000434407 ZNF487B1APH4 448 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 BUB1O43683 1085 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 BUB1BO60566 1050 aaPredicted RBP18.71■□□□□ 0.59
HLA-F-220ENST00000434407 IPO7O95373 1038 aaKnown RBP18.71■□□□□ 0.59
HLA-F-220ENST00000434407 CTSLP07711 333 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 DRD3P35462 400 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 PTGER3P43115 390 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 PSMD8P48556 350 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 PAPOLAP51003 745 aaKnown RBP18.71■□□□□ 0.59
HLA-F-220ENST00000434407 VAV2P52735 878 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 SFSWAPQ12872 951 aaKnown RBP18.71■□□□□ 0.59
HLA-F-220ENST00000434407 MMRN1Q13201 1228 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 KRT81Q14533 505 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 CARD16Q5EG05 197 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 TMCO3Q6UWJ1 677 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 DPY19L3Q6ZPD9 716 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 SLC41A1Q8IVJ1 513 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 AADATQ8N5Z0 425 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 KCTD6Q8NC69 237 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 ACRBPQ8NEB7 543 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 CADM4Q8NFZ8 388 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 VOPP1Q96AW1 172 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 CALR3Q96L12 384 aaKnown RBP18.71■□□□□ 0.59
HLA-F-220ENST00000434407 LACRTQ9GZZ8 138 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 TNKS2Q9H2K2 1166 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 GRPEL1Q9HAV7 217 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 SGK2Q9HBY8 427 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 FBXL12Q9NXK8 326 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 SERGEFQ9UGK8 458 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 FZD4Q9ULV1 537 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 ALG6Q9Y672 507 aa18.71■□□□□ 0.59
HLA-F-220ENST00000434407 C3orf70A6NLC5 250 aaPredicted RBP18.7■□□□□ 0.58
HLA-F-220ENST00000434407 J3KR12 359 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 NDUFS2O75306 463 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 TMCC1O94876 653 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 GSRP00390 522 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 IL1BP01584 269 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 COMTP21964 271 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 KDELR1P24390 212 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 CHRNA3P32297 505 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 ACSL1P33121 698 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 NOP2P46087 812 aaKnown RBP18.7■□□□□ 0.58
HLA-F-220ENST00000434407 FAM46CQ5VWP2 391 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 PEAR1Q5VY43 1037 aaPredicted RBP18.7■□□□□ 0.58
HLA-F-220ENST00000434407 C11orf63Q6NUN7 778 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 MAP7D3Q8IWC1 876 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 TP53INP2Q8IXH6 220 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 CHST14Q8NCH0 376 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 TPCN2Q8NHX9 752 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 PCDH19Q8TAB3 1148 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 PIP4K2CQ8TBX8 421 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 RAPGEF5Q92565 580 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 FOXJ1Q92949 421 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 GPR174Q9BXC1 333 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 ARRDC1-AS1Q9H2J1 176 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 PARD6AQ9NPB6 346 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 WASF2Q9Y6W5 498 aa18.7■□□□□ 0.58
HLA-F-220ENST00000434407 A0A1W2PP55 124 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 C1QTNF3-AMACRE9PGA6 284 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 PRNPP04156 253 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 GJC1P36383 396 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 RECQLP46063 649 aaPredicted RBP18.69■□□□□ 0.58
HLA-F-220ENST00000434407 DHPSP49366 369 aaPredicted RBP18.69■□□□□ 0.58
HLA-F-220ENST00000434407 METAP1P53582 386 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 ZNF33AQ06730 810 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 ANKRD20A8PQ5CZ79 823 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 LEKR1Q6ZMV7 388 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 ZNF354CQ86Y25 554 aa18.69■□□□□ 0.58
HLA-F-220ENST00000434407 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms