RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 DNAJC24Q6P3W2 148 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 RBM44Q6ZP01 1051 aaKnown RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 Q7L0L9 218 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 VASH1Q7L8A9 365 aaPredicted RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 ZNF554Q86TJ5 538 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 FAM160B2Q86V87 743 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 ERI1Q8IV48 349 aaKnown RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 ZFPM1Q8IX07 1006 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 COLGALT2Q8IYK4 626 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 NRSN1Q8IZ57 195 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 TDHQ8IZJ6 230 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 TMEM35BQ8NCS4 154 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 GABPB2Q8TAK5 448 aaPredicted RBP8.21□□□□□ -1.09
VTI1A-202ENST00000432306 PYDC1Q8WXC3 89 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 CCDC138Q96M89 665 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 CLUHP3Q96NS8 147 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 DEFB118Q96PH6 123 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 RTKNQ9BST9 563 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 MENTQ9BUN1 341 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 C20orf27Q9GZN8 174 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 RSAD1Q9HA92 442 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 POPDC2Q9HBU9 364 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 PCDH18Q9HCL0 1135 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 PAK5Q9P286 719 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 MTRRQ9UBK8 725 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 CHMP2BQ9UQN3 213 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 DTNAQ9Y4J8 743 aa8.21□□□□□ -1.09
VTI1A-202ENST00000432306 PTPRFP10586 1907 aa8.21□□□□□ -1.1
VTI1A-202ENST00000432306 MYH11P35749 1972 aa8.21□□□□□ -1.1
VTI1A-202ENST00000432306 HMX2A2RU54 273 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RRN3P2A6NIE6 340 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 GOLGA8SH3BPF8 625 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 GOLGA8MH3BSY2 632 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 WDR46O15213 610 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 FRS3O43559 492 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CST8O60676 142 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 PFDN1O60925 122 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ENTPD3O75355 529 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 LRCH4O75427 683 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TRMUO75648 421 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 APOEP02649 317 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 INHAP05111 366 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 C8BP07358 591 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RPS2P15880 293 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RAG1P15918 1043 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF23P17027 643 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ITGAXP20702 1163 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TPP2P29144 1249 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 HARS2P49590 506 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ADARP55265 1226 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 YWHAZP63104 245 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TUBA4AP68366 448 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SLC25A3Q00325 362 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 LRRC74AQ0VAA2 488 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SPP2Q13103 211 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ADGRE1Q14246 886 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 KRT81Q14533 505 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 TRIP10Q15642 601 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 HADHQ16836 314 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 MYLK3Q32MK0 819 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 C2CD6Q53TS8 623 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 NXPE4Q6UWF7 544 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 Q6ZNX1 250 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 GALNT13Q8IUC8 556 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 UNC45BQ8IWX7 931 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ARFGAP1Q8N6T3 406 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SLC26A7Q8TE54 656 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ADAMTS18Q8TE60 1221 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CHURC1Q8WUH1 139 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 NMD3Q96D46 503 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 DCUN1D1Q96GG9 259 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CNDP1Q96KN2 507 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF778Q96MU6 729 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 EBF4Q9BQW3 602 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ADPGKQ9BRR6 497 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 PI4K2AQ9BTU6 479 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 LHX5Q9H2C1 402 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 PAK6Q9NQU5 681 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 KCTD5Q9NXV2 234 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 NSMCE4AQ9NXX6 385 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 UBAP1Q9NZ09 502 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 BTBD7Q9P203 1132 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 BCAP29Q9UHQ4 241 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 RIMS3Q9UJD0 308 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 APOBEC2Q9Y235 224 aaKnown RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 WDR37Q9Y2I8 494 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SH3GLB1Q9Y371 365 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CEPT1Q9Y6K0 416 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 PRSS51A0A1B0GVH4 220 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF487B1APH4 448 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 MCF2LO15068 1137 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 ALDH1A2O94788 518 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SERPINE1P05121 402 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 FGF3P11487 239 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-202ENST00000432306 STMN1P16949 149 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 SLC5A2P31639 672 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 FLT3LGP49771 235 aa8.2□□□□□ -1.1
VTI1A-202ENST00000432306 CDK9P50750 372 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms