RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 NXF3Q9H4D5 531 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 EML4Q9HC35 981 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 IPO11Q9UI26 975 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 ZDHHC2Q9UIJ5 367 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 MDM4O15151 490 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
SGMS1-203ENST00000429490 INPP5AQ14642 412 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 CES4AQ5XG92 561 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 NAPRTQ6XQN6 538 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 PDZD7Q9H5P4 517 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 PNPLA8Q9NP80 782 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
SGMS1-203ENST00000429490 SNNO75324 88 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 CTSHP09668 335 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 IL4RP24394 825 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 LIMK2P53671 638 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ZIK1Q3SY52 487 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 C6orf10Q5SRN2 563 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 CLEC6AQ6EIG7 209 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 SCIMPQ6UWF3 145 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 HERC6Q8IVU3 1022 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 TKTL2Q9H0I9 626 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 TBC1D23Q9NUY8 699 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 RBM22Q9NW64 420 aaKnown RBP eCLIP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ERI2A8K979 691 aaKnown RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 HMBSP08397 361 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 CCDC166P0CW27 439 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 CYP2C9P11712 490 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 MATKP42679 507 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ADGRE1Q14246 886 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ZNF280DQ6N043 979 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ANKRD52Q8NB46 1076 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 GMLQ99445 158 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 OR12D3Q9UGF7 316 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 PRPF19Q9UMS4 504 aaKnown RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 TCRBV5S1A1TA0A578 114 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 HACD1B0YJ81 288 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 E2F6O75461 281 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 CYP3A5P20815 502 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 SYPL2Q5VXT5 272 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 HSPBAP1Q96EW2 488 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ZNF778Q96MU6 729 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 BTBD9Q96Q07 612 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 FTHL17Q9BXU8 183 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 FZD8Q9H461 694 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 ALG9Q9H6U8 611 aa13.94□□□□□ -0.18
SGMS1-203ENST00000429490 RSL24D1Q9UHA3 163 aaKnown RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 UBQLN1Q9UMX0 589 aaKnown RBP13.94□□□□□ -0.18
SGMS1-203ENST00000429490 GOLGA8CPA6NN73 597 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 CLOCKO15516 846 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 LGALS2P05162 132 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
SGMS1-203ENST00000429490 ADCYAP1R1P41586 468 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 MTTPP55157 894 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 ZNF618Q5T7W0 954 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 GPR107Q5VW38 600 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 WSCD1Q658N2 575 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 TFAP2DQ7Z6R9 452 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 DNAJB14Q8TBM8 379 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 WNT8BQ93098 351 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 FCRL3Q96P31 734 aaPredicted RBP13.93□□□□□ -0.18
SGMS1-203ENST00000429490 PRRC2BQ5JSZ5 2229 aaKnown RBP13.93□□□□□ -0.18
SGMS1-203ENST00000429490 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.93□□□□□ -0.18
SGMS1-203ENST00000429490 PDLIM1O00151 329 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 IRF6O14896 467 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 CD151P48509 253 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 MAP3K10Q02779 954 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 LAMC2Q13753 1193 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 NT5DC4Q86YG4 428 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 BCO2Q9BYV7 579 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 NACA2Q9H009 215 aa13.93□□□□□ -0.18
SGMS1-203ENST00000429490 UTP6Q9NYH9 597 aaKnown RBP13.93□□□□□ -0.18
SGMS1-203ENST00000429490 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.184e-6■■■■■ 94.6
SGMS1-203ENST00000429490 HMX2A2RU54 273 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 TRIM38O00635 465 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 GSTA4O15217 222 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 CLIC3O95833 236 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 IQCF3P0C7M6 154 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 PABPC4LP0CB38 370 aaKnown RBP13.92□□□□□ -0.18
SGMS1-203ENST00000429490 PSMA4P25789 261 aaKnown RBP13.92□□□□□ -0.18
SGMS1-203ENST00000429490 GRM1Q13255 1194 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 VGLL4Q14135 290 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 PLCL1Q15111 1095 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 CMPK2Q5EBM0 449 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 AGAP9Q5VTM2 703 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 FBXL19Q6PCT2 694 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 DEFB132Q7Z7B7 95 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 OR52K2Q8NGK3 314 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 ZFP28Q8NHY6 868 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 MAGEE2Q8TD90 523 aaPredicted RBP13.92□□□□□ -0.18
SGMS1-203ENST00000429490 BLOC1S5Q8TDH9 187 aa13.92□□□□□ -0.18
SGMS1-203ENST00000429490 TRIM15Q9C019 465 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms