RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 RACK1P63244 317 aaKnown RBP21.09■□□□□ 0.97
HSPG2-205ENST00000427897 ZBED6P86452 979 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 CNTN1Q12860 1018 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 HNRNPDQ14103 355 aaKnown RBP21.09■□□□□ 0.97
HSPG2-205ENST00000427897 SUZ12Q15022 739 aaKnown RBP21.09■□□□□ 0.97
HSPG2-205ENST00000427897 ARSIQ5FYB1 569 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 PLEKHA7Q6IQ23 1121 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 DNAAF5Q86Y56 855 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 PCDH20Q8N6Y1 951 aaKnown RBP21.09■□□□□ 0.97
HSPG2-205ENST00000427897 TMIEQ8NEW7 156 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 GRIN3AQ8TCU5 1115 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 SETD7Q8WTS6 366 aaKnown RBP21.09■□□□□ 0.97
HSPG2-205ENST00000427897 SERAC1Q96JX3 654 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 NDFIP2Q9NV92 336 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.09■□□□□ 0.979e-8■■□□□ 11.9
HSPG2-205ENST00000427897 SNX11Q9Y5W9 270 aa21.09■□□□□ 0.97
HSPG2-205ENST00000427897 UPK3BL1B0FP48 263 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 UPK3BL2E5RIL1 263 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 CBFA2T2O43439 604 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 SERPING1P05155 500 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 METAP1P53582 386 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 TPI1P60174 286 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 CARD16Q5EG05 197 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 E4F1Q66K89 784 aaPredicted RBP21.08■□□□□ 0.97
HSPG2-205ENST00000427897 NLRP14Q86W24 1093 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 CHST14Q8NCH0 376 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 C1orf216Q8TAB5 229 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 SYN2Q92777 582 aaPredicted RBP21.08■□□□□ 0.97
HSPG2-205ENST00000427897 NCAPGQ9BPX3 1015 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 HEPHQ9BQS7 1158 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 DHX35Q9H5Z1 703 aaKnown RBP21.08■□□□□ 0.97
HSPG2-205ENST00000427897 TM7SF3Q9NS93 570 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 ZNF212Q9UDV6 495 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 PCSK1NQ9UHG2 260 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 CAPN11Q9UMQ6 739 aa21.08■□□□□ 0.97
HSPG2-205ENST00000427897 FCF1Q9Y324 198 aaKnown RBP21.08■□□□□ 0.97
HSPG2-205ENST00000427897 PCDH15Q96QU1 1955 aa21.08■□□□□ 0.96
HSPG2-205ENST00000427897 NUMA1Q14980 2115 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 PLRG1O43660 514 aaKnown RBP21.07■□□□□ 0.96
HSPG2-205ENST00000427897 BUB1O43683 1085 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 SH3BP5O60239 455 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 PRPSAP2O60256 369 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 ZMPSTE24O75844 475 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 CD59P13987 128 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 CD38P28907 300 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 MAT2AP31153 395 aaKnown RBP21.07■□□□□ 0.96
HSPG2-205ENST00000427897 ARF5P84085 180 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 OGDHQ02218 1023 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 KIF19Q2TAC6 998 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 DPY19L3Q6ZPD9 716 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 RTL3Q8N8U3 475 aaKnown RBP21.07■□□□□ 0.96
HSPG2-205ENST00000427897 SLC6A18Q96N87 628 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 TM6SF2Q9BZW4 377 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 ANGPTL2Q9UKU9 493 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 AP4E1Q9UPM8 1137 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 DNAH14Q0VDD8 3507 aa21.07■□□□□ 0.96
HSPG2-205ENST00000427897 TMEM191CA6NGB0 347 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 ZSCAN5CA6NGD5 496 aaPredicted RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 FGF10O15520 208 aaPredicted RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 KDELR3O43731 214 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 CTSLP07711 333 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 HTR7P34969 479 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 NUDT1P36639 197 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 YBEYP58557 167 aaPredicted RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 SNRPD1P62314 119 aaKnown RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 SIM1P81133 766 aaPredicted RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 FOXC1Q12948 553 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 TSR1Q2NL82 804 aaKnown RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 ERMARDQ5T6L9 678 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 FBXL19Q6PCT2 694 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 LAYNQ6UX15 382 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 LEKR1Q6ZMV7 388 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 NAXDQ8IW45 347 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 XPO4Q9C0E2 1151 aaKnown RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 ZDHHC6Q9H6R6 413 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 IL21RQ9HBE5 538 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 HECAQ9UBI9 543 aaPredicted RBP21.06■□□□□ 0.96
HSPG2-205ENST00000427897 SLCO1B1Q9Y6L6 691 aa21.06■□□□□ 0.96
HSPG2-205ENST00000427897 CXorf51AA0A1B0GTR3 108 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 SPAARA0A1B0GVQ0 90 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 EEF2KO00418 725 aaKnown RBP21.05■□□□□ 0.96
HSPG2-205ENST00000427897 KCNK3O14649 394 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 VILLO15195 856 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 DFNA5O60443 496 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 RNGTTO60942 597 aaKnown RBP21.05■□□□□ 0.96
HSPG2-205ENST00000427897 LEFTY1O75610 366 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 PCDH8O95206 1070 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 TPM1P09493 284 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 PBX1P40424 430 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 CCNHP51946 323 aaPredicted RBP21.05■□□□□ 0.96
HSPG2-205ENST00000427897 RAD51Q06609 339 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 STAT4Q14765 748 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 SETMARQ53H47 684 aaPredicted RBP21.05■□□□□ 0.96
HSPG2-205ENST00000427897 ARTNQ5T4W7 220 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 AGBL4Q5VU57 503 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 ERN2Q76MJ5 926 aaKnown RBP21.05■□□□□ 0.96
HSPG2-205ENST00000427897 PIP4P1Q86T03 277 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 ISG20Q96AZ6 181 aaKnown RBP21.05■□□□□ 0.96
HSPG2-205ENST00000427897 ISCUQ9H1K1 167 aa21.05■□□□□ 0.96
HSPG2-205ENST00000427897 PREBQ9HCU5 417 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms