RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 TCP10LQ8TDR4 215 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 CERS2Q96G23 380 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
RPL28-202ENST00000426763 EXOC2Q96KP1 924 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 HBS1LQ9Y450 684 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 SNAI1O95863 264 aaPredicted RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 TACR2P21452 398 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 CPA2P48052 419 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 PGS1Q32NB8 556 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 AHCYL2Q96HN2 611 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 A0A0U1RQJ8 604 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 MYBPHLA2RUH7 354 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 PSMD12O00232 456 aaPredicted RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 RHOQP17081 205 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 HLA-DPA1P20036 260 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 PTPN9P43378 593 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 ATP6AP1LQ52LC2 224 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 GPSM1Q86YR5 675 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 CLEC4FQ8N1N0 589 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 AENQ8WTP8 325 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 OTULINQ96BN8 352 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 CSPG4P5Q96PW8 444 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 APOBEC3GQ9HC16 384 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 CREBZFQ9NS37 354 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 VTI1BQ9UEU0 232 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 EFR3BQ9Y2G0 817 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 COL2A1P02458 1487 aaPredicted RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 COL6A1P12109 1028 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 LPOP22079 712 aaPredicted RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 EEF1DP29692 281 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 SLC1A6P48664 564 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 CLCN5P51795 746 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 PKN2Q16513 984 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 STXBP5Q5T5C0 1151 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 PRSS55Q6UWB4 352 aaPredicted RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 ELMO1Q92556 727 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 MIEF1Q9NQG6 463 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 RNF186Q9NXI6 227 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 BUD23O43709 281 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 GCKP35557 465 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 SKIV2L2P42285 1042 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 ITIH4Q14624 930 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 ARHGAP17Q68EM7 881 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 SAPCD2Q86UD0 394 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 NDRG1Q92597 394 aaKnown RBP14.06□□□□□ -0.16
RPL28-202ENST00000426763 RIPOR3Q96MK2 946 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 ARL15Q9NXU5 204 aa14.06□□□□□ -0.16
RPL28-202ENST00000426763 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 A0A1W2PQ45 241 aaPredicted RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 A0A1W2PQY0 241 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 MILR1Q7Z6M3 343 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 KREMEN2Q8NCW0 462 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 P2RY11Q96G91 374 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 PARVBQ9HBI1 364 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 EVA1BQ9NVM1 165 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 A0A0U1RQF3 1178 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 E9PAM4 449 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 UBDO15205 165 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 ACSL4O60488 711 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 C1RP00736 705 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 DNTTP04053 509 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 SLC2A4P14672 509 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 RFC2P35250 354 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 ERFP50548 548 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 LDLRAD1Q5T700 205 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 HGSNATQ68CP4 663 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 KYAT3Q6YP21 454 aaKnown RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 CEP19Q96LK0 163 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 OPTCQ9UBM4 332 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 INSL6Q9Y581 213 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 TNPO3Q9Y5L0 923 aaKnown RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 SLC38A8A6NNN8 435 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 C8AP07357 584 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 YBEYP58557 167 aaPredicted RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 CRADDP78560 199 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 ZNF844Q08AG5 666 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 CYLC2Q14093 348 aaPredicted RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 TIGD5Q53EQ6 642 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 TPGS2Q68CL5 300 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 TMEM175Q9BSA9 504 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 TMEM120AQ9BXJ8 343 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 NRP1O14786 923 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 HTR1BP28222 390 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 PEX5P50542 639 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 NFYCQ13952 458 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 FUT11Q495W5 492 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 MARK2Q7KZI7 788 aaKnown RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 BPIFA1Q9NP55 256 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 C6orf203Q9P0P8 240 aaPredicted RBP14.05□□□□□ -0.16
RPL28-202ENST00000426763 COQ4Q9Y3A0 265 aa14.05□□□□□ -0.16
RPL28-202ENST00000426763 RPL17P18621 184 aaKnown RBP14.04□□□□□ -0.16
RPL28-202ENST00000426763 LMO2P25791 158 aa14.04□□□□□ -0.16
RPL28-202ENST00000426763 ASPAP45381 313 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms