RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GNSP15586 552 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 SPINK2P20155 84 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 PSMA2P25787 234 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 CD27P26842 260 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 MAT2AP31153 395 aaKnown RBP13.01□□□□□ -0.33
GPC1-204ENST00000426280 PIP5KL1Q5T9C9 394 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 TXNRD3NBQ6F5E7 133 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 C22orf39Q6P5X5 142 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 OR8K1Q8NGG5 319 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 OR2T34Q8NGX1 318 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 SYN2Q92777 582 aaPredicted RBP13.01□□□□□ -0.33
GPC1-204ENST00000426280 ARHGEF26Q96DR7 871 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 C2orf49Q9BVC5 232 aaPredicted RBP13.01□□□□□ -0.33
GPC1-204ENST00000426280 PCED1AQ9H1Q7 454 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 PARVAQ9NVD7 372 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 FZD4Q9ULV1 537 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 NENFQ9UMX5 172 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 MFHAS1Q9Y4C4 1052 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 PLXNA2O75051 1894 aa13.01□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3DA0A087WVF3 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3EA0A087X179 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 A0A1W2PR77 199 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
GPC1-204ENST00000426280 PLRG1O43660 514 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 ADH1BP00325 375 aa13□□□□□ -0.33
GPC1-204ENST00000426280 SYPP08247 313 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TPM1P09493 284 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 CSRP1P21291 193 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 IL1R2P27930 398 aa13□□□□□ -0.33
GPC1-204ENST00000426280 EPHB2P29323 1055 aa13□□□□□ -0.33
GPC1-204ENST00000426280 PMLP29590 882 aa13□□□□□ -0.33
GPC1-204ENST00000426280 MIPP30301 263 aa13□□□□□ -0.33
GPC1-204ENST00000426280 HNRNPH3P31942 346 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 EIF4A3P38919 411 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 MAPKAPK2P49137 400 aa13□□□□□ -0.33
GPC1-204ENST00000426280 SERPINH1P50454 418 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 DNA2P51530 1060 aa13□□□□□ -0.33
GPC1-204ENST00000426280 ATXN3P54252 364 aaPredicted RBP13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
GPC1-204ENST00000426280 ZNF783Q6ZMS7 281 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
GPC1-204ENST00000426280 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 TC2NQ8N9U0 490 aa13□□□□□ -0.33
GPC1-204ENST00000426280 SPC24Q8NBT2 197 aa13□□□□□ -0.33
GPC1-204ENST00000426280 OR6K2Q8NGY2 324 aa13□□□□□ -0.33
GPC1-204ENST00000426280 GRIN3AQ8TCU5 1115 aa13□□□□□ -0.33
GPC1-204ENST00000426280 KLK6Q92876 244 aa13□□□□□ -0.33
GPC1-204ENST00000426280 ZNF653Q96CK0 615 aa13□□□□□ -0.33
GPC1-204ENST00000426280 HMCESQ96FZ2 354 aa13□□□□□ -0.33
GPC1-204ENST00000426280 PPP1R9BQ96SB3 815 aa13□□□□□ -0.33
GPC1-204ENST00000426280 KCTD15Q96SI1 283 aaPredicted RBP13□□□□□ -0.33
GPC1-204ENST00000426280 DNAJC7Q99615 494 aa13□□□□□ -0.33
GPC1-204ENST00000426280 CHP1Q99653 195 aa13□□□□□ -0.33
GPC1-204ENST00000426280 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
GPC1-204ENST00000426280 SNRNP25Q9BV90 132 aaKnown RBP13□□□□□ -0.33
GPC1-204ENST00000426280 TM6SF2Q9BZW4 377 aa13□□□□□ -0.33
GPC1-204ENST00000426280 THAP2Q9H0W7 228 aa13□□□□□ -0.33
GPC1-204ENST00000426280 ABHD10Q9NUJ1 306 aa13□□□□□ -0.33
GPC1-204ENST00000426280 TMEM51Q9NW97 253 aa13□□□□□ -0.33
GPC1-204ENST00000426280 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
GPC1-204ENST00000426280 WASF3Q9UPY6 502 aa13□□□□□ -0.33
GPC1-204ENST00000426280 ANKRD6Q9Y2G4 727 aa13□□□□□ -0.33
GPC1-204ENST00000426280 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 H0Y8X5 98 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 KPNA3O00505 521 aaPredicted RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 KDELR3O43731 214 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 OPHN1O60890 802 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 LRCH4O75427 683 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 LEFTY1O75610 366 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 ITIH2P19823 946 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 POLD3Q15054 466 aaPredicted RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 CYTH1Q15438 398 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 SHBQ15464 509 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 CARD16Q5EG05 197 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 ATXN7L2Q5T6C5 722 aaPredicted RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 ACBD5Q5T8D3 534 aaPredicted RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 RABEPKQ7Z6M1 372 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 TMIEQ8NEW7 156 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 CNTNAP3BQ96NU0 1288 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 CNTNAP3Q9BZ76 1288 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 SLC39A8Q9C0K1 460 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 MAGEH1Q9H213 219 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 DHX35Q9H5Z1 703 aaKnown RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 OSGEPQ9NPF4 335 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 ZFR2Q9UPR6 939 aaKnown RBP12.99□□□□□ -0.33
GPC1-204ENST00000426280 BTBD3Q9Y2F9 522 aa12.99□□□□□ -0.33
GPC1-204ENST00000426280 LRRC72A6NJI9 287 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 WASH4PA8MWX3 477 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 RASA4BC9J798 803 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 J3KR12 359 aa12.98□□□□□ -0.33
GPC1-204ENST00000426280 ALOX15BO15296 676 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms