RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 GCNT7Q6ZNI0 430 aa12.51□□□□□ -0.41
CLCN4-203ENST00000421085 TRABD2AQ86V40 505 aa12.51□□□□□ -0.41
CLCN4-203ENST00000421085 COX4I2Q96KJ9 171 aa12.51□□□□□ -0.41
CLCN4-203ENST00000421085 SENP6Q9GZR1 1112 aaPredicted RBP12.51□□□□□ -0.41
CLCN4-203ENST00000421085 SLC17A7Q9P2U7 560 aa12.51□□□□□ -0.41
CLCN4-203ENST00000421085 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
CLCN4-203ENST00000421085 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
CLCN4-203ENST00000421085 HECW2Q9P2P5 1572 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 HAT1O14929 419 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PLOD3O60568 738 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TRMUO75648 421 aaKnown RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CCDC166P0CW27 439 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 EIF4BP23588 611 aaKnown RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 AKAP5P24588 427 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 IFNGR2P38484 337 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 BLMHQ13867 455 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ATP13A4Q4VNC1 1196 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PMF1Q6P1K2 205 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PAGE2Q7Z2X7 111 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 GLT6D1Q7Z4J2 308 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TRIM48Q8IWZ4 208 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 OMDQ99983 421 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 AHSPQ9NZD4 102 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 EGFL7Q9UHF1 273 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 RAP2CQ9Y3L5 183 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TFECO14948 347 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 LYNP07948 512 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 YBX3P16989 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 LHX1P48742 406 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 SLC6A3Q01959 620 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CERS2Q96G23 380 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CLPTM1LQ96KA5 538 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PNPOQ9NVS9 261 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 C2orf71A6NGG8 1288 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 HDAC3O15379 428 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TSHRP16473 764 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CRATP43155 626 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 RARRES1P49788 294 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TUBP50607 506 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 NOL11Q9H8H0 719 aaKnown RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ING3Q9NXR8 418 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TMEM216Q9P0N5 145 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PCP4L1A6NKN8 68 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ITGAVP06756 1048 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ZNF7P17097 686 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 HPCAL1P37235 193 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 GUCA1AP43080 201 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 BNIP1Q12981 228 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 FBXO47Q5MNV8 452 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 C6orf52Q5T4I8 152 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 DEFB106AQ8N104 65 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CRISPLD1Q9H336 500 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 OPTCQ9UBM4 332 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ADAM28Q9UKQ2 775 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 H7C0S8 307 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 TSPAN8P19075 237 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ACAT1P24752 427 aaKnown RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 GABRB2P47870 512 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CBX3Q13185 183 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 DPYSQ14117 519 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 ATAD3BQ5T9A4 648 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 CLNKQ7Z7G1 428 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PSTKQ8IV42 348 aaKnown RBP12.5□□□□□ -0.41
CLCN4-203ENST00000421085 NPAS2Q99743 824 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 IL22Q9GZX6 179 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PXMP2Q9NR77 195 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 SLC25A13Q9UJS0 675 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
CLCN4-203ENST00000421085 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 E5RJQ4 531 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 NPR3P17342 541 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ATP5F1P24539 256 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 NAA20P61599 178 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 LLGL2Q6P1M3 1020 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 AADATQ8N5Z0 425 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 HASPINQ8TF76 798 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 OSBPL6Q9BZF3 934 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 ERGIC3Q9Y282 383 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 LYVE1Q9Y5Y7 322 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 CNTNAP2Q9UHC6 1331 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 TISP43B9A030 160 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 TCAIMQ8N3R3 496 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 PTGR2Q8N8N7 351 aaPredicted RBP12.49□□□□□ -0.41
CLCN4-203ENST00000421085 VMP1Q96GC9 406 aa12.49□□□□□ -0.41
CLCN4-203ENST00000421085 DDX43Q9NXZ2 648 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms