RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 AADATQ8N5Z0 425 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 LZTR1Q8N653 840 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 PCDH20Q8N6Y1 951 aaKnown RBP13.42□□□□□ -0.26
HDAC8-210ENST00000412342 PQLC3Q8N755 202 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 CHST14Q8NCH0 376 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 OR8D1Q8WZ84 308 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 LOXL4Q96JB6 756 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 TNKS2Q9H2K2 1166 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 SCML1Q9UN30 329 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 WASF2Q9Y6W5 498 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
HDAC8-210ENST00000412342 FAM186AA6NE01 2351 aa13.42□□□□□ -0.26
HDAC8-210ENST00000412342 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 SDK1Q7Z5N4 2213 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
HDAC8-210ENST00000412342 ARHGAP42A6NI28 874 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 BUB1O43683 1085 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 TMCC1O94876 653 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 PEX11BO96011 259 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 DNTTP04053 509 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 RETP07949 1114 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 SLC8A1P32418 973 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 PTGER3P43115 390 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 PSMD8P48556 350 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 MARCKSL1P49006 195 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 PAFAH1B3Q15102 231 aaKnown RBP13.41□□□□□ -0.26
HDAC8-210ENST00000412342 CYTH1Q15438 398 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 TAZQ16635 292 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 INO80DQ53TQ3 878 aaPredicted RBP13.41□□□□□ -0.26
HDAC8-210ENST00000412342 SPDYCQ5MJ68 293 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 TMCO3Q6UWJ1 677 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 SLC36A4Q6YBV0 504 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 DPY19L3Q6ZPD9 716 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 USP30Q70CQ3 517 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
HDAC8-210ENST00000412342 VSIG1Q86XK7 387 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 SLC41A1Q8IVJ1 513 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 LRRC8AQ8IWT6 810 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 DCLK2Q8N568 766 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 CASKIN2Q8WXE0 1202 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 RUBCNQ92622 972 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 TOE1Q96GM8 510 aaKnown RBP13.41□□□□□ -0.26
HDAC8-210ENST00000412342 CALN1Q9BXU9 219 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 LHX3Q9UBR4 397 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 RAB23Q9ULC3 237 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 WDR87Q6ZQQ6 2873 aa13.41□□□□□ -0.26
HDAC8-210ENST00000412342 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 A0A1W2PP55 124 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 GRID2IPA4D2P6 1211 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ARHGAP6O43182 974 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 PSTPIP1O43586 416 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 SPOPO43791 374 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 MFSD11O43934 449 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ADH1BP00325 375 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 GSRP00390 522 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 IL1BP01584 269 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ACADMP11310 421 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 C5AR1P21730 350 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 OXTRP30559 389 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 CHRNA3P32297 505 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ACSL1P33121 698 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 RPL6Q02878 288 aaKnown RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 IL10RBQ08334 325 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ELF2Q15723 593 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 CARD16Q5EG05 197 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 OR2AP1Q8NGE2 309 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ZNF419Q96HQ0 510 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 CALR3Q96L12 384 aaKnown RBP13.4□□□□□ -0.26
HDAC8-210ENST00000412342 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 TM6SF2Q9BZW4 377 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 PARD6AQ9NPB6 346 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 FBXL12Q9NXK8 326 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 FZD4Q9ULV1 537 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 ANKRD36A6QL64 1941 aa13.4□□□□□ -0.26
HDAC8-210ENST00000412342 BCLAF3A2AJT9 711 aaKnown RBP13.39□□□□□ -0.27
HDAC8-210ENST00000412342 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 DFFAO00273 331 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 BNIP3LO60238 219 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 MAFKO60675 156 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 KRT1P04264 644 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 SERPINB6P35237 376 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
HDAC8-210ENST00000412342 AGBL4Q5VU57 503 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms