RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 TRPM5Q9NZQ8 1165 aa14.59□□□□□ -0.07
MINDY4-202ENST00000409881 COX16Q9P0S2 106 aa14.59□□□□□ -0.07
MINDY4-202ENST00000409881 SLC24A2Q9UI40 661 aa14.59□□□□□ -0.07
MINDY4-202ENST00000409881 PPM1HQ9ULR3 514 aa14.59□□□□□ -0.07
MINDY4-202ENST00000409881 STAP1Q9ULZ2 295 aa14.59□□□□□ -0.07
MINDY4-202ENST00000409881 COMMD3-BMI1R4GMX3 469 aa14.59□□□□□ -0.07
MINDY4-202ENST00000409881 PRRC2BQ5JSZ5 2229 aaKnown RBP14.59□□□□□ -0.07
MINDY4-202ENST00000409881 FAM237BA0A1B0GVD1 139 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 OPHN1O60890 802 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 DLDP09622 509 aaKnown RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 TFE3P19532 575 aaPredicted RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 RAP1GDS1P52306 607 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 INHBCP55103 352 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 GEMIN4P57678 1058 aaKnown RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 PITX1P78337 314 aaPredicted RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 KCNC3Q14003 757 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 PIGHQ14442 188 aaPredicted RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 LRRC36Q1X8D7 754 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 SH3PXD2AQ5TCZ1 1133 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 TMC5Q6UXY8 1006 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 ARHGAP24Q8N264 748 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 CCDC110Q8TBZ0 833 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 TBCBQ99426 244 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 PRKD2Q9BZL6 878 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 PHACTR1Q9C0D0 580 aa14.58□□□□□ -0.07
MINDY4-202ENST00000409881 DNAAF2Q9NVR5 837 aaKnown RBP14.58□□□□□ -0.07
MINDY4-202ENST00000409881 ZNF840PA6NDX5 716 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 DPYSL4O14531 572 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 ALOX15BO15296 676 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 GLP2RO95838 553 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 ZDHHC11BP0C7U3 371 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 DESP17661 470 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 BGNP21810 368 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 GABRR2P28476 465 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 GAD2Q05329 585 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 RAPH1Q70E73 1250 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 TMC8Q8IU68 726 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 SCUBE1Q8IWY4 988 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 ST13P4Q8IZP2 240 aaPredicted RBP14.58□□□□□ -0.08
MINDY4-202ENST00000409881 EFHBQ8N7U6 833 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 RBM15BQ8NDT2 890 aaKnown RBP14.58□□□□□ -0.08
MINDY4-202ENST00000409881 FAM172AQ8WUF8 416 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 OVCA2Q8WZ82 227 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 TTC17Q96AE7 1141 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 APOL5Q9BWW9 433 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 SFXN1Q9H9B4 322 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 DZANK1Q9NVP4 752 aa14.58□□□□□ -0.08
MINDY4-202ENST00000409881 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 CRABP2P29373 138 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 GRIA2P42262 883 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 PTPN9P43378 593 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 NME3Q13232 169 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 SLC25A52Q3SY17 297 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 ATP13A4Q4VNC1 1196 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 RAB6CQ53S08 254 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 C10orf120Q5SQS8 335 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 LCA5Q86VQ0 697 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 TREML1Q86YW5 311 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 BANPQ8N9N5 519 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 DQX1Q8TE96 717 aaKnown RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 NAT14Q8WUY8 206 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 ZNF707Q96C28 371 aaPredicted RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 HAUS1Q96CS2 278 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 GAS2L1Q99501 681 aaPredicted RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 THTPAQ9BU02 230 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 RAB6CQ9H0N0 254 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 VPS11Q9H270 941 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 CCSER2Q9H7U1 834 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 IL21Q9HBE4 155 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 CLIC5Q9NZA1 410 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 RABGEF1Q9UJ41 708 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 CLUHO75153 1309 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 hCG_2014768A0A024R1R8 64 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 M0QYT0 321 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 MDM4O15151 490 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 LIASO43766 372 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 TLR5O60602 858 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 CIB2O75838 187 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 PTPN2P17706 415 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 AP2B1P63010 937 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 KDSRQ06136 332 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 RARS2Q5T160 578 aaKnown RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 ZFYVE27Q5T4F4 411 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 CENPUQ71F23 418 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 GRASPQ7Z6J2 395 aaPredicted RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 TMEM150AQ86TG1 271 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 TAC4Q86UU9 113 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 MYLK4Q86YV6 388 aaPredicted RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 NIPA2Q8N8Q9 360 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 SMG7Q92540 1137 aaKnown RBP14.57□□□□□ -0.08
MINDY4-202ENST00000409881 HIC2Q96JB3 615 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 GCNAQ96QF7 691 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 NPY6RQ99463 290 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 PAFAH2Q99487 392 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 LRRC3Q9BY71 257 aa14.57□□□□□ -0.08
MINDY4-202ENST00000409881 NACA2Q9H009 215 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms