RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 NSMCE1Q8WV22 266 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 TFB1MQ8WVM0 346 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 MAML1Q92585 1016 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 PBXIP1Q96AQ6 731 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 ISG20Q96AZ6 181 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 MS4A14Q96JA4 679 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 QKIQ96PU8 341 aaKnown RBP eCLIP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 MMP17Q9ULZ9 603 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 R3HDM2Q9Y2K5 976 aaKnown RBP16.93■□□□□ 0.3
SUMO1-208ENST00000409627 ACTL7AQ9Y615 435 aa16.93■□□□□ 0.3
SUMO1-208ENST00000409627 TTC34A8MYJ7 566 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 SGK1O00141 431 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 SMAD6O43541 496 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 PI15O43692 258 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 ADAM23O75077 832 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 ZNF189O75820 626 aaPredicted RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 TMCC1O94876 653 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 RBP3P10745 1247 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 EIF3EP60228 445 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 AP1B1Q10567 949 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 HNRNPDQ14103 355 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 LBRQ14739 615 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 DLG2Q15700 870 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 SLC45A4Q5BKX6 768 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 ADAT2Q7Z6V5 191 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 SPEM1Q8N4L4 309 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 TEX26Q8N6G2 289 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 PCDH20Q8N6Y1 951 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 SLC35B2Q8TB61 432 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 SUN2Q9UH99 717 aa16.92■□□□□ 0.3
SUMO1-208ENST00000409627 FCF1Q9Y324 198 aaKnown RBP16.92■□□□□ 0.3
SUMO1-208ENST00000409627 KMT2EQ8IZD2 1858 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 EDDM13A0A1B0GTR0 161 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
SUMO1-208ENST00000409627 WASH3PC4AMC7 463 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 H7C0C1 242 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 MTSS1O43312 755 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 EPHX1P07099 455 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 HLA-EP13747 358 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 HOXB2P14652 356 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 VAV1P15498 845 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 WASP42768 502 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 ATP5OP48047 213 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 RENBPP51606 427 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 IFI35P80217 286 aaPredicted RBP16.91■□□□□ 0.3
SUMO1-208ENST00000409627 SLC10A7Q0GE19 358 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 CYTH1Q15438 398 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 CCNG2Q16589 344 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 ACCSLQ4AC99 568 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 MARC1Q5VT66 337 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 SYT13Q7L8C5 426 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 CREG2Q8IUH2 290 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 PLPP6Q8IY26 295 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 BBS5Q8N3I7 341 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 FBXL6Q8N531 539 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 LRRN4Q8WUT4 740 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 CINPQ9BW66 212 aaPredicted RBP16.91■□□□□ 0.3
SUMO1-208ENST00000409627 LHX3Q9UBR4 397 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 RNF14Q9UBS8 474 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 SEPT3Q9UH03 358 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 AMACRQ9UHK6 382 aa16.91■□□□□ 0.3
SUMO1-208ENST00000409627 BCLAF3A2AJT9 711 aaKnown RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 LIASO43766 372 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 ZNF821O75541 412 aaPredicted RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 GSRP00390 522 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 CCNB1P14635 433 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 HSPA9P38646 679 aaKnown RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 MMP13P45452 471 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 RHOAP61586 193 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 CAMK2GQ13555 558 aaPredicted RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 ZNF235Q14590 738 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 HEATR6Q6AI08 1181 aaKnown RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 DRICH1Q6PGQ1 229 aaPredicted RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 MAMSTRQ6ZN01 415 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 Q6ZVU0 165 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 ZNF366Q8N895 744 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 ATG4AQ8WYN0 398 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 PTPRN2Q92932 1015 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 NKD2Q969F2 451 aaPredicted RBP16.9■□□□□ 0.3
SUMO1-208ENST00000409627 PSKH2Q96QS6 385 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 IL12RB2Q99665 862 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 HOMER3Q9NSC5 361 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 HAUS2Q9NVX0 235 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 DNPEPQ9ULA0 475 aa16.9■□□□□ 0.3
SUMO1-208ENST00000409627 A0A1W2PQF6 199 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 ESPNB1AK53 854 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 KCNK1O00180 336 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 ZNF500O60304 480 aaPredicted RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 SIN3BO75182 1162 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 RBL1P28749 1068 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 SNRPD1P62314 119 aaKnown RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 MTAPQ13126 283 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 BYSLQ13895 437 aaKnown RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 STARD3Q14849 445 aa16.89■□□□□ 0.29
SUMO1-208ENST00000409627 OASLQ15646 514 aaKnown RBP16.89■□□□□ 0.29
SUMO1-208ENST00000409627 CRY1Q16526 586 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms