RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 GTF3C2Q8WUA4 911 aaPredicted RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 NAT14Q8WUY8 206 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 CASP10Q92851 521 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 FAXDC2Q96IV6 333 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 GORASP1Q9BQQ3 440 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 CCDC106Q9BWC9 280 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 GBA3Q9H227 469 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SUDS3Q9H7L9 328 aaPredicted RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 YY1AP1Q9H869 796 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 ANGPTL2Q9UKU9 493 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SLC27A5Q9Y2P5 690 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 TRPV2Q9Y5S1 764 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 ZCWPW2A0A1B0GU75 182 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 CAPN14A8MX76 684 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 NT5C1B-RDH14C9J2C7 533 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 TSPAN3O60637 253 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SNNO75324 88 aaPredicted RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 LUC7L3O95232 432 aaKnown RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 GSRP00390 522 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 LMNAP02545 664 aaKnown RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 AXLP30530 894 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 LIMK2P53671 638 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SLC5A3P53794 718 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 AP2B1P63010 937 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 CDH17Q12864 832 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 KRT72Q14CN4 511 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 PAFAH1B3Q15102 231 aaKnown RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 DNAL1Q4LDG9 190 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 ZNF789Q5FWF6 425 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 ARL13AQ5H913 290 aaPredicted RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 RBM20Q5T481 1227 aaKnown RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 CNSTQ6PJW8 725 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 TMC7Q7Z402 723 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 ATAD1Q8NBU5 361 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 ZNF333Q96JL9 665 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SLC45A3Q96JT2 553 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 LENG8Q96PV6 779 aaPredicted RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 CYP2S1Q96SQ9 504 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 TBL1YQ9BQ87 522 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SLC39A8Q9C0K1 460 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 IL1RL2Q9HB29 575 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 NMUR1Q9HB89 426 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 DMAP1Q9NPF5 467 aaPredicted RBP4.43□□□□□ -1.7
SMC6-203ENST00000402989 TCF7L2Q9NQB0 619 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 CNGB3Q9NQW8 809 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SLC38A7Q9NVC3 462 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 GABRQQ9UN88 632 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 SSX2IPQ9Y2D8 614 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 CRYL1Q9Y2S2 319 aa4.43□□□□□ -1.7
SMC6-203ENST00000402989 FAM95CA0A1B0GW59 222 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 KLF11O14901 512 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 BIRC5O15392 142 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 HNRNPCL1O60812 293 aaKnown RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 TRIM13O60858 407 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 TM7SF2O76062 418 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 FBXO21O94952 628 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 AHSGP02765 367 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 HLA-DQB2P05538 268 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 GSTA2P09210 222 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 MLNP12872 115 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 CNTFP26441 200 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 RGS2P41220 211 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 CD86P42081 329 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 MAGEA6P43360 314 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 PPIDQ08752 370 aaKnown RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 PSMD5Q16401 504 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 SH2D4BQ5SQS7 431 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 RAP1GAP2Q684P5 730 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 STEAP4Q687X5 459 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 NAPEPLDQ6IQ20 393 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ARCQ7LC44 396 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ZNF467Q7Z7K2 595 aaPredicted RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 CEP97Q8IW35 865 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 CFAP52Q8N1V2 620 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 PCDH20Q8N6Y1 951 aaKnown RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 PPHLN1Q8NEY8 458 aaKnown RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 BLOC1S5Q8TDH9 187 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 PDCD6IPQ8WUM4 868 aaKnown RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 UPF1Q92900 1129 aaKnown RBP eCLIP4.42□□□□□ -1.7
SMC6-203ENST00000402989 RCN3Q96D15 328 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ZNF419Q96HQ0 510 aaPredicted RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 SLC2A13Q96QE2 648 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ZIC5Q96T25 663 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 SEPT5Q99719 369 aaPredicted RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 NPAS2Q99743 824 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 SPON2Q9BUD6 331 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 KATNAL1Q9BW62 490 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ILKAPQ9H0C8 392 aaPredicted RBP4.42□□□□□ -1.7
SMC6-203ENST00000402989 POMKQ9H5K3 350 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 SPC25Q9HBM1 224 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 NMRK2Q9NPI5 230 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ARHGEF38Q9NXL2 777 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ADA2Q9NZK5 511 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 IGSF9Q9P2J2 1179 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 HCSTQ9UBK5 93 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 KCTD3Q9Y597 815 aa4.42□□□□□ -1.7
SMC6-203ENST00000402989 ACTL7AQ9Y615 435 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms