RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 SP9P0CG40 484 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 PYGMP11217 842 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 KRT10P13645 584 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 GABRG2P18507 467 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 COPAP53621 1224 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 ZBTB16Q05516 673 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 SLC10A2Q12908 348 aaPredicted RBP17.72■□□□□ 0.43
HDAC11-202ENST00000402259 TIGD7Q6NT04 549 aaPredicted RBP17.72■□□□□ 0.43
HDAC11-202ENST00000402259 WDR5BQ86VZ2 330 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 TP53INP2Q8IXH6 220 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 HDAC11Q96DB2 347 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 OLFM3Q96PB7 478 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 RSPH9Q9H1X1 276 aaPredicted RBP17.72■□□□□ 0.43
HDAC11-202ENST00000402259 CARD9Q9H257 536 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 JRKLQ9Y4A0 524 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 FANCMQ8IYD8 2048 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 PLXND1Q9Y4D7 1925 aa17.72■□□□□ 0.43
HDAC11-202ENST00000402259 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 MCF2LO15068 1137 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 RNASEH1O60930 286 aaKnown RBP17.71■□□□□ 0.43
HDAC11-202ENST00000402259 ZNF821O75541 412 aaPredicted RBP17.71■□□□□ 0.43
HDAC11-202ENST00000402259 TMCC1O94876 653 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 APOC2P02655 101 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 CCNCP24863 283 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 PDK1Q15118 436 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 HS1BP3Q53T59 392 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 DCAF12L1Q5VU92 463 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 KAZNQ674X7 775 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 ANO7Q6IWH7 933 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 TSSK4Q6SA08 328 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 ARHGAP36Q6ZRI8 547 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 Q6ZVU0 165 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 DSG4Q86SJ6 1040 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 NETO2Q8NC67 525 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 MDGA1Q8NFP4 955 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 HMGB4Q8WW32 186 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 OR8D1Q8WZ84 308 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 MRGPRX1Q96LB2 322 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 TLR10Q9BXR5 811 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 MTG2Q9H4K7 406 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 ZSCAN32Q9NX65 697 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 SCML1Q9UN30 329 aa17.71■□□□□ 0.43
HDAC11-202ENST00000402259 FCF1Q9Y324 198 aaKnown RBP17.71■□□□□ 0.43
HDAC11-202ENST00000402259 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.43
HDAC11-202ENST00000402259 EML5Q05BV3 1969 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 USP27XA6NNY8 438 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 PPP1R12AO14974 1030 aaPredicted RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 AXIN1O15169 862 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 TJP3O95049 919 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 PEX11BO96011 259 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 VAV1P15498 845 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 NDUFV2P19404 249 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 RECQLP46063 649 aaPredicted RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 SNRPD1P62314 119 aaKnown RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 DYNLT1P63172 113 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 ADCY2Q08462 1091 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 PPIDQ08752 370 aaKnown RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 HNRNPDQ14103 355 aaKnown RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 CYTH1Q15438 398 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 CARD16Q5EG05 197 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 ZNF776Q68DI1 518 aaPredicted RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 TMPRSS6Q8IU80 811 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 ZBTB44Q8NCP5 570 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 PRSS33Q8NF86 280 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 OR2AP1Q8NGE2 309 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 OR2A12Q8NGT7 310 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 NSMCE1Q8WV22 266 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 MAML1Q92585 1016 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 P3H4Q92791 437 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 FAM129BQ96TA1 746 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 MKRN2Q9H000 416 aaKnown RBP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 BCCIPQ9P287 314 aaKnown RBP eCLIP17.7■□□□□ 0.42
HDAC11-202ENST00000402259 SEPT3Q9UH03 358 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 AMACRQ9UHK6 382 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 PCDHGA2Q9Y5H1 932 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 HEY1Q9Y5J3 304 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 ACTL7AQ9Y615 435 aa17.7■□□□□ 0.42
HDAC11-202ENST00000402259 MATN3O15232 486 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 CNR2P34972 360 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 PTPN5P54829 565 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 RHOAP61586 193 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 RPS14P62263 151 aaKnown RBP17.69■□□□□ 0.42
HDAC11-202ENST00000402259 TCF15Q12870 199 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 ZNF211Q13398 564 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-202ENST00000402259 BYSLQ13895 437 aaKnown RBP17.69■□□□□ 0.42
HDAC11-202ENST00000402259 LBRQ14739 615 aaKnown RBP17.69■□□□□ 0.42
HDAC11-202ENST00000402259 ZNF569Q5MCW4 686 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 SEL1L2Q5TEA6 688 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 LEKR1Q6ZMV7 388 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 STK40Q8N2I9 435 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 BBS5Q8N3I7 341 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 PRCCQ92733 491 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-202ENST00000402259 SIPA1Q96FS4 1042 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 LRIG1Q96JA1 1093 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 GDAP1L1Q96MZ0 367 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 PSKH2Q96QS6 385 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
HDAC11-202ENST00000402259 HEMGNQ9BXL5 484 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms