RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PLCL1Q15111 1095 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 RGS21Q2M5E4 152 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 ZNF829Q3KNS6 432 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 SIX6OS1Q8N1H7 587 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 SPATA6LQ8N4H0 392 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 SLC15A4Q8N697 577 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 RNF157Q96PX1 679 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 FRMD8P1Q9BZ68 369 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 NDEL1Q9GZM8 345 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 TMA7Q9Y2S6 64 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 CORINQ9Y5Q5 1042 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 BCAS2O75934 225 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 PRKCBP05771 671 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 ZNF286BP0CG31 522 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 GJA5P36382 358 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 CA9Q16790 459 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 DCLK2Q8N568 766 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 TMCO5AQ8N6Q1 288 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 GPR20Q99678 358 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 HNRNPABQ99729 332 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 SLC2A11Q9BYW1 496 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 CCDC167Q9P0B6 97 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 PCDHB12Q9Y5F1 795 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 GPC6Q9Y625 555 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 V9GYQ6 96 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 LSM8O95777 96 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 PRDX6P30041 224 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 ICAM3P32942 547 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 YWHAEP62258 255 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 DGKDQ16760 1214 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 FAM160B1Q5W0V3 765 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 ZC3H7AQ8IWR0 971 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 PGAM4Q8N0Y7 254 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 CBR4Q8N4T8 237 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 CMASQ8NFW8 434 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 RP9Q8TA86 221 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 C17orf50Q8WW18 174 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 PIWIL1Q96J94 861 aaKnown RBP17.34■□□□□ 0.37
PTPRA-205ENST00000399903 TASP1Q9H6P5 420 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 SLC8A2Q9UPR5 921 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 ST14Q9Y5Y6 855 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 DGKBQ9Y6T7 804 aa17.34■□□□□ 0.37
PTPRA-205ENST00000399903 A0A0G2JLL6 359 aaPredicted RBP17.33■□□□□ 0.37
PTPRA-205ENST00000399903 E7ENX8 843 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 H3BMQ9 156 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 TK2O00142 265 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 SOCS2O14508 198 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 RCVRNP35243 200 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 PCYT1AP49585 367 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 PSME3P61289 254 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 ZBED5Q49AG3 693 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 PRRT2Q7Z6L0 340 aaPredicted RBP17.33■□□□□ 0.37
PTPRA-205ENST00000399903 COG8Q96MW5 612 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 NIF3L1Q9GZT8 377 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 HIPK3Q9H422 1215 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 GTSE1Q9NYZ3 720 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 SQORQ9Y6N5 450 aa17.33■□□□□ 0.37
PTPRA-205ENST00000399903 A0A096LPK6 155 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.33■□□□□ 0.36
PTPRA-205ENST00000399903 IQCF3P0C7M6 154 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 GRIA3P42263 894 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 NME5P56597 212 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 PRPSAP1Q14558 356 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 TARBP2Q15633 366 aaKnown RBP17.33■□□□□ 0.36
PTPRA-205ENST00000399903 ANKRD13AQ8IZ07 590 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 DLG3Q92796 817 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 TAMM41Q96BW9 452 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 FBXL20Q96IG2 436 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 AP4E1Q9UPM8 1137 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 CDYLQ9Y232 598 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 LCTP09848 1927 aa17.33■□□□□ 0.36
PTPRA-205ENST00000399903 TRIM13O60858 407 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 VTNP04004 478 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 ARL13AQ5H913 290 aaPredicted RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 FAM219BQ5XKK7 198 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 STRA8Q7Z7C7 330 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 NIPA2Q8N8Q9 360 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 TBC1D15Q8TC07 691 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 FAM49BQ9NUQ9 324 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 PPP2R3BQ9Y5P8 575 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 ZBTB42B2RXF5 422 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 MSCO60682 206 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 CXCL8P10145 99 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 HEATR6Q6AI08 1181 aaKnown RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 DNAJC14Q6Y2X3 702 aaPredicted RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 XYLT1Q86Y38 959 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 BPIFB6Q8NFQ5 453 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 RPF2Q9H7B2 306 aaKnown RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 PCDH12Q9NPG4 1184 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 VPS45Q9NRW7 570 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 MKS1Q9NXB0 559 aa17.32■□□□□ 0.36
PTPRA-205ENST00000399903 WARS2Q9UGM6 360 aaKnown RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 MAFO75444 373 aaPredicted RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 LDHAP00338 332 aaKnown RBP17.32■□□□□ 0.36
PTPRA-205ENST00000399903 GARSP41250 739 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms