RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ALADP13716 330 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 TCF4P15884 667 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 CES3Q6UWW8 571 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ARHGAP22Q7Z5H3 698 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 MCOLN2Q8IZK6 566 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 AP3S1Q92572 193 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 PLAGL2Q9UPG8 496 aa12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 MRPS7Q9Y2R9 242 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-219ENST00000399649 FAM92AA1XBS5 289 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 LYNP07948 512 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 ADSLP30566 484 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 UGT1A5P35504 534 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 PTENP60484 403 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 GRB14Q14449 540 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 SLC39A12Q504Y0 691 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 LRRC17Q8N6Y2 441 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 KBTBD7Q8WVZ9 684 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 RHOBTB2Q9BYZ6 727 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 PCDHA11Q9Y5I1 949 aa12.46□□□□□ -0.42
CACNA1C-219ENST00000399649 MAGEB3O15480 346 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SREBF1P36956 1147 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 RPL3P39023 403 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SLC26A3P40879 764 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SCRN3Q0VDG4 424 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SQLEQ14534 574 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SLC41A1Q8IVJ1 513 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 BPIFB6Q8NFQ5 453 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 DNAJB3Q8WWF6 145 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CXorf40BQ96DE9 158 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TBCBQ99426 244 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 GMPPBQ9Y5P6 360 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 HOXB8P17481 243 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 AXLP30530 894 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 AP1S2P56377 157 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SRSF11Q05519 484 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 KYAT3Q6YP21 454 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 HIPK1Q86Z02 1210 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TEX47Q8TBZ9 253 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 BHLHE41Q9C0J9 482 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CHP2O43745 196 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CCDC166P0CW27 439 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 MAPTP10636 758 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CBX5P45973 191 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 RPL14P50914 215 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 RAPSNQ13702 412 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ALKBH2Q6NS38 261 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ULK3Q6PHR2 472 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 OR7A2PQ8NGA2 310 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ZDHHC15Q96MV8 337 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 RASSF1Q9NS23 344 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 MCUBQ9NWR8 336 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 GAKO14976 1311 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TPP1O14773 563 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 PRKAR1AP10644 381 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ACAT1P24752 427 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 IDH2P48735 452 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ANTXR2P58335 489 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 BROXQ5VW32 411 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ZNF571Q7Z3V5 609 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TAS1R2Q8TE23 839 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 IPCEF1Q8WWN9 437 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ATL1Q8WXF7 558 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TARBP1Q13395 1621 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 GPR75-ASB3A0A0A6YYF3 556 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 PQBP1O60828 265 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CATP04040 527 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 PAPD7Q5XG87 772 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 B3GNT6Q6ZMB0 384 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SPATA20Q8TB22 786 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 MAGEE2Q8TD90 523 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CDADC1Q9BWV3 514 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 KCNN2Q9H2S1 579 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 NR2F1P10589 423 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 MFSD10Q14728 455 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 C4orf19Q8IY42 314 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 RNF148Q8N7C7 305 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 POU5F2Q8N7G0 328 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ACTL9Q8TC94 416 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CHID1Q9BWS9 393 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 TKTL2Q9H0I9 626 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 MRPL17Q9NRX2 175 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 ERGIC3Q9Y282 383 aa12.45□□□□□ -0.42
CACNA1C-219ENST00000399649 CAPN6Q9Y6Q1 641 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms