RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 MEI4A8MW99 385 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 PLK4O00444 970 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 RAMP2O60895 175 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 RNASEH2AO75792 299 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 ENGP17813 658 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 CHRNA3P32297 505 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 HCAR3P49019 387 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 ADPRHP54922 357 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 YBEYP58557 167 aaPredicted RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 TPI1P60174 286 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 SFSWAPQ12872 951 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 KIAA0895LQ68EN5 471 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 TXNRD3NBQ6F5E7 133 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 NCEH1Q6PIU2 408 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 DPY19L3Q6ZPD9 716 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 DSG4Q86SJ6 1040 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 HDDC3Q8N4P3 179 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 CHST14Q8NCH0 376 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 TMIEQ8NEW7 156 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 ISG20Q96AZ6 181 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 BTBD6Q96KE9 485 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 NUSAP1Q9BXS6 441 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 PACSIN1Q9BY11 444 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 TNKS2Q9H2K2 1166 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 DHX35Q9H5Z1 703 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 FSCN3Q9NQT6 498 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 EIF2B4Q9UI10 523 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 FCF1Q9Y324 198 aaKnown RBP17.04■□□□□ 0.32
APTR-201ENST00000398043 WASF2Q9Y6W5 498 aa17.04■□□□□ 0.32
APTR-201ENST00000398043 PRPSAP2O60256 369 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 SLC25A11Q02978 314 aaKnown RBP17.03■□□□□ 0.32
APTR-201ENST00000398043 SERINC3Q13530 473 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 DPYSQ14117 519 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 DPYSL2Q16555 572 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 AGBL4Q5VU57 503 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 RGL4Q8IZJ4 473 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 PCDH20Q8N6Y1 951 aaKnown RBP17.03■□□□□ 0.32
APTR-201ENST00000398043 OR2T34Q8NGX1 318 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 HMCESQ96FZ2 354 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 OMDQ99983 421 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 EBF2Q9HAK2 575 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 OSGEPQ9NPF4 335 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 CWC15Q9P013 229 aaKnown RBP17.03■□□□□ 0.32
APTR-201ENST00000398043 SUSD2Q9UGT4 822 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 ANAPC7Q9UJX3 599 aa17.03■□□□□ 0.32
APTR-201ENST00000398043 A0A1B0GTW7 788 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 C4orf47A7E2U8 309 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 RASA4BC9J798 803 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 EEF2KO00418 725 aaKnown RBP17.02■□□□□ 0.32
APTR-201ENST00000398043 SLC7A4O43246 635 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 RASA4O43374 803 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 PLRG1O43660 514 aaKnown RBP17.02■□□□□ 0.32
APTR-201ENST00000398043 CFIP05156 583 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 NDST2P52849 883 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 TAS2R38P59533 333 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 BNC1Q01954 994 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 CNTN1Q12860 1018 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 PARP15Q460N3 678 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 CARD16Q5EG05 197 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 PIP5KL1Q5T9C9 394 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 FAM46CQ5VWP2 391 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.02■□□□□ 0.32
APTR-201ENST00000398043 RFX8Q6ZV50 586 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 ERMP1Q7Z2K6 904 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 ARHGAP12Q8IWW6 846 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.32
APTR-201ENST00000398043 TC2NQ8N9U0 490 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 GANCQ8TET4 914 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 ARRDC3Q96B67 414 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 NHEJ1Q9H9Q4 299 aaPredicted RBP17.02■□□□□ 0.32
APTR-201ENST00000398043 PDFQ9HBH1 243 aa17.02■□□□□ 0.32
APTR-201ENST00000398043 ARID1BQ8NFD5 2236 aaPredicted RBP17.02■□□□□ 0.32
APTR-201ENST00000398043 TDRD6O60522 2096 aaKnown RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 DCDC2BA2VCK2 349 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 ZSCAN5CA6NGD5 496 aaPredicted RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 AKR1B15C9JRZ8 316 aaPredicted RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 C1QTNF3-AMACRE9PGA6 284 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 ARHGAP33O14559 1287 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 BCAT2O15382 392 aaPredicted RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 LATO43561 262 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 BNIP3LO60238 219 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 GJB3O75712 270 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 TPM1P09493 284 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 RARAP10276 462 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 GNSP15586 552 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 ERCC2P18074 760 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 CD27P26842 260 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 CCR5P51681 352 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 ZNF135P52742 658 aaPredicted RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 GEMIN4P57678 1058 aaKnown RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 BOLA3Q53S33 107 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 KCNT1Q5JUK3 1230 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 DGLUCYQ7Z3D6 616 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 CPNE8Q86YQ8 564 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 CNGA4Q8IV77 575 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 NPWQ8N729 165 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms