RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RPAINQ86UA6 219 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 UCMAQ8WVF2 138 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 RMDN1Q96DB5 314 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 IFT43Q96FT9 208 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 OLFM3Q96PB7 478 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 WDR6Q9NNW5 1121 aaKnown RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 OR51F1A6NGY5 319 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 MLNP12872 115 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 GRK2P25098 689 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PGFP49763 221 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PSEN1P49768 467 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 IDH3AP50213 366 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 POLE2P56282 527 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 KLC1Q07866 573 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 NSUN2Q08J23 767 aaKnown RBP eCLIP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 OTUD1Q5VV17 481 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 MBLAC2Q68D91 279 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 SPATA24Q86W54 205 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 FBXO32Q969P5 355 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 OR52B2Q96RD2 323 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 IL22Q9GZX6 179 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 GBA3Q9H227 469 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC7A8Q9UHI5 535 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 SSX2IPQ9Y2D8 614 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 NCF1BA6NI72 391 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 NCF1CA8MVU1 366 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 NCAM2O15394 837 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 MTSS1O43312 755 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 MGEA5O60502 916 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 NCF1P14598 390 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PAMP19021 973 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PAPOLAP51003 745 aaKnown RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 DPYSQ14117 519 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PTPRCAPQ14761 206 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 MAP7D1Q3KQU3 841 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 ARL13AQ5H913 290 aaPredicted RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PPM1LQ5SGD2 360 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 SH2D4BQ5SQS7 431 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 FAM219BQ5XKK7 198 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 SEL1L3Q68CR1 1132 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRIM67Q6ZTA4 783 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF280BQ86YH2 543 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 EFHBQ8N7U6 833 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 MAGEC3Q8TD91 643 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 CMTM5Q96DZ9 223 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 PTCD3Q96EY7 689 aaKnown RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 TEKT5Q96M29 485 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 EMCNQ9ULC0 261 aa10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 AAR2Q9Y312 384 aaKnown RBP10.6□□□□□ -0.71
CPSF1P1-201ENST00000397477 ANXA9O76027 345 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 SUPT7LO94864 414 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 SERPINA6P08185 405 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 LIMK2P53671 638 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ANO4Q32M45 955 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 LPCAT4Q643R3 524 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 NAPRTQ6XQN6 538 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ARCQ7LC44 396 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 CYP2S1Q96SQ9 504 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 VCXQ9H320 206 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 SUDS3Q9H7L9 328 aaPredicted RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 SCOCQ9UIL1 159 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRHDEQ9UKU6 1024 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ARID2Q68CP9 1835 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 BIRC5O15392 142 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF235Q14590 738 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 GALNT4Q8N4A0 578 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 CNTD1Q8N815 330 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 LENG8Q96PV6 779 aaPredicted RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZIC5Q96T25 663 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 GPAMQ9HCL2 828 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 IGSF9Q9P2J2 1179 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 RCOR3Q9P2K3 495 aaPredicted RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 GTF2IRD1Q9UHL9 959 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 LRFN2Q9ULH4 789 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF646O15015 1829 aaPredicted RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PSME4Q14997 1843 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 C9JVG2 144 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 AURKAO14965 403 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 AHSGP02765 367 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 NPY2RP49146 381 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 CDH13P55290 713 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 WNT3AP56704 352 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 TBX4P57082 545 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 DSC2Q02487 901 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PRKCZQ05513 592 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PPIDQ08752 370 aaKnown RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 RPS6KA2Q15349 733 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 NEPROQ6NW34 567 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 LINC00523Q86TU6 105 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 FAM156AQ8NDB6 213 aa10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZSCAN18Q8TBC5 510 aaPredicted RBP10.59□□□□□ -0.71
CPSF1P1-201ENST00000397477 PIP4K2CQ8TBX8 421 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms