RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 MAP3K13O43283 966 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 PSTPIP1O43586 416 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 ZNF821O75541 412 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 TMCC1O94876 653 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 IL1BP01584 269 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 SERPINB6P35237 376 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 RECQLP46063 649 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 DNA2P51530 1060 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 DSG4Q86SJ6 1040 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 ZC3H10Q96K80 434 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 TM6SF2Q9BZW4 377 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 PABPC3Q9H361 631 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 PDFQ9HBH1 243 aa21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 DDX56Q9NY93 547 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 UBA2Q9UBT2 640 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 FARP1Q9Y4F1 1045 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 RIF1Q5UIP0 2472 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-206ENST00000397408 J3KR12 359 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 MCF2LO15068 1137 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 NRDCO43847 1150 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 MFSD11O43934 449 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 PRAMEF11O60813 436 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 IGLV3-19P01714 112 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 CD6P30203 668 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 CCZ1BP86790 482 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 CCZ1P86791 482 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 ODF2Q5BJF6 829 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 PMS2CLQ68D20 193 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 NCBP2-AS2Q69YL0 99 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 LAIR1Q6GTX8 287 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 SLC36A4Q6YBV0 504 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 DPY19L3Q6ZPD9 716 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 ARHGAP36Q6ZRI8 547 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 FAM124AQ86V42 546 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 GANCQ8TET4 914 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 ANP32BQ92688 251 aaKnown RBP21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 SP110Q9HB58 689 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 SCML1Q9UN30 329 aa21.58■■□□□ 1.05
TSPAN4-206ENST00000397408 THADAQ6YHU6 1953 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 C3orf70A6NLC5 250 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 GFRA3O60609 400 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 RHOBTB1O94844 696 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 ADH1BP00325 375 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 SLC8A1P32418 973 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 RPL6Q02878 288 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 LPCAT2Q7L5N7 544 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 CHST14Q8NCH0 376 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 CASKIN2Q8WXE0 1202 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 ISG20Q96AZ6 181 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 RNF25Q96BH1 459 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 TOE1Q96GM8 510 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 IPO11Q9UI26 975 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 NUMA1Q14980 2115 aa21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 EP300Q09472 2414 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-206ENST00000397408 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 A0A1W2PP55 124 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 GRID2IPA4D2P6 1211 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 C1QTNF3-AMACRE9PGA6 284 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 CTSLP07711 333 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 OXTRP30559 389 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 CHRNA3P32297 505 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 MARCKSL1P49006 195 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 CCNHP51946 323 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 METAP1P53582 386 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 IFI16Q16666 785 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 INO80DQ53TQ3 878 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 CARD16Q5EG05 197 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 VSIG1Q86XK7 387 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 TMEFF1Q8IYR6 380 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 PQLC3Q8N755 202 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 PIP4K2CQ8TBX8 421 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 GRIN3AQ8TCU5 1115 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 RNF157Q96PX1 679 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 FBXL12Q9NXK8 326 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 WSB2Q9NYS7 404 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 NCDNQ9UBB6 729 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 SERGEFQ9UGK8 458 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 GMEB2Q9UKD1 530 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 SARDHQ9UL12 918 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 PPM1HQ9ULR3 514 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 FAM186AA6NE01 2351 aa21.56■■□□□ 1.04
TSPAN4-206ENST00000397408 ZNF487B1APH4 448 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 NDUFS2O75306 463 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 C5AR1P21730 350 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 RHOAP61586 193 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 IL10RBQ08334 325 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 PAFAH1B3Q15102 231 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 POM121L1PQ3SYA9 428 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 FAM46CQ5VWP2 391 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 USP30Q70CQ3 517 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 ARMCX6Q7L4S7 300 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 RYBPQ8N488 228 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 ATPAF2Q8N5M1 289 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 AADATQ8N5Z0 425 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 LRRC57Q8N9N7 239 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 OR2AP1Q8NGE2 309 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 OR6K2Q8NGY2 324 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 KIAA1524Q8TCG1 905 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 KRT35Q92764 455 aa21.55■■□□□ 1.04
TSPAN4-206ENST00000397408 OMDQ99983 421 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms