RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PTPN9P43378 593 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 HADHBP55084 474 aaKnown RBP15.84■□□□□ 0.13
GNE-202ENST00000396594 PGS1Q32NB8 556 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 WSCD1Q658N2 575 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 FAM183BPQ6ZVS7 135 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 GLMNQ92990 594 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 OTULINQ96BN8 352 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 PLD4Q96BZ4 506 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 CERS2Q96G23 380 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 KLHL3Q9UH77 587 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 ANKDD1BA6NHY2 528 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 MLH1P40692 756 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 PPP3CAQ08209 521 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 RFX4Q33E94 735 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 RFTN2Q52LD8 501 aaPredicted RBP15.84■□□□□ 0.13
GNE-202ENST00000396594 USP39Q53GS9 565 aaKnown RBP15.84■□□□□ 0.13
GNE-202ENST00000396594 FAM35AQ86V20 835 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 ZNF248Q8NDW4 579 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 SLC27A6Q9Y2P4 619 aa15.84■□□□□ 0.13
GNE-202ENST00000396594 KCNH1O95259 989 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 NFATC1O95644 943 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 POU6F1Q14863 301 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 CDC73Q6P1J9 531 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 ADHFE1Q8IWW8 467 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 EDEM1Q92611 657 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 BBS4Q96RK4 519 aa15.83■□□□□ 0.13
GNE-202ENST00000396594 MRTO4Q9UKD2 239 aaKnown RBP15.83■□□□□ 0.13
GNE-202ENST00000396594 hCG_1818297A0A087WSY0 165 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 PDZK1P1A8MUH7 402 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 NFKB1P19838 968 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 LSM12Q3MHD2 195 aaKnown RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 C9orf57Q5W0N0 161 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 CYB5D1Q6P9G0 228 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 TRIT1Q9H3H1 467 aaKnown RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 LEF1Q9UJU2 399 aaPredicted RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 ZNF112Q9UJU3 913 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 ZNF232Q9UNY5 417 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 MAFBQ9Y5Q3 323 aaPredicted RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 GLUD1P00367 558 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 CCNB1P14635 433 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 ETS1P14921 441 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 ATP6V1C1P21283 382 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 SERPINB1P30740 379 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 SCTRP47872 440 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 RGS1Q08116 209 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 TBL3Q12788 808 aaKnown RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 LAPTM5Q13571 262 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 AGKQ53H12 422 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 RNF43Q68DV7 783 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 PIGZQ86VD9 579 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 DPP10Q8N608 796 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 ST3GAL5Q9UNP4 418 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 PNMA8CA0A1B0GUJ8 204 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 WWP2O00308 870 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 DNAJA2O60884 412 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 XIAPP98170 497 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 TSNQ15631 228 aaKnown RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 DDR2Q16832 855 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 CASP12Q6UXS9 341 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 CYP2W1Q8TAV3 490 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 PROX1Q92786 737 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 TNFRSF25Q93038 417 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 RMDN2Q96LZ7 410 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 ACOX2Q99424 681 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 SLITRK2Q9H156 845 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 RETREG1Q9H6L5 497 aa15.83■□□□□ 0.12
GNE-202ENST00000396594 SSU72Q9NP77 194 aaKnown RBP15.83■□□□□ 0.12
GNE-202ENST00000396594 STX11O75558 287 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 HDCP19113 662 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 RFC2P35250 354 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 TALDO1P37837 337 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 MIIPQ5JXC2 388 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 KIAA0408Q6ZU52 694 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 WFIKKN2Q8TEU8 576 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 HDAC7Q8WUI4 952 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 SGF29Q96ES7 293 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 FAM118BQ9BPY3 351 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 MID1IP1Q9NPA3 183 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 ANGPT4Q9Y264 503 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 MRPS23Q9Y3D9 190 aaKnown RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 MRASO14807 208 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 ADRB2P07550 413 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 BGNP21810 368 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 ARL2P36404 184 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 CHMP1BQ7LBR1 199 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 TRPC4APQ8TEL6 797 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 FUBP3Q96I24 572 aaKnown RBP eCLIP15.82■□□□□ 0.12
GNE-202ENST00000396594 Q96MT0 163 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 ANKZF1Q9H8Y5 726 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 ZBTB39O15060 712 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 MDM4O15151 490 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 NDUFS2O75306 463 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 RHOQP17081 205 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 ACAT1P24752 427 aaKnown RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 DAB2P98082 770 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 DDX39BQ13838 428 aaKnown RBP15.82■□□□□ 0.12
GNE-202ENST00000396594 CREG2Q8IUH2 290 aa15.82■□□□□ 0.12
GNE-202ENST00000396594 SCUBE3Q8IX30 993 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms