RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 NAA30Q147X3 362 aaPredicted RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 PAGE2Q7Z2X7 111 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 FOXP4Q8IVH2 680 aaPredicted RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 SLITRK4Q8IW52 837 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 GFM1Q96RP9 751 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 USP17L3A6NCW0 530 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 USP17L4A6NCW7 530 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 GNAO1P09471 354 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 TLX1P31314 330 aaPredicted RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 PTPN5P54829 565 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 PRKCEQ02156 737 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 USP17L1Q7RTZ2 530 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 HM13Q8TCT9 377 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 OPLAHO14841 1288 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 ITGB6P18564 788 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 HNF4AP41235 474 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 SPDYCQ5MJ68 293 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 PRR23CQ6ZRP0 262 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 KCNK18Q7Z418 384 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 ZZZ3Q8IYH5 903 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 LSM14AQ8ND56 463 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 CASKIN2Q8WXE0 1202 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 KAT5Q92993 513 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 PCDHA10Q9Y5I2 948 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 DNMT1P26358 1616 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 FAM86C2PA6NEL3 165 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 UGT2B11O75310 529 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 SERPINB7O75635 380 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 FDX1P10109 184 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 HOXD10P28358 340 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 ERP29P30040 261 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 CDK9P50750 372 aaKnown RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 FNBP1LQ5T0N5 605 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
USP49-203ENST00000394253 LPCAT1Q8NF37 534 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 ZFP28Q8NHY6 868 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 RFKQ969G6 155 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 TAF6LQ9Y6J9 622 aa13.57□□□□□ -0.24
USP49-203ENST00000394253 CASP1P29466 404 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SLC39A8Q9C0K1 460 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 PLEKHA1Q9HB21 404 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 FBXO9Q9UK97 447 aaPredicted RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 RBMX2Q9Y388 322 aaKnown RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 ARL5AQ9Y689 179 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 FCHO1O14526 889 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MRASO14807 208 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 NADKO95544 446 aaPredicted RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 EYA4O95677 639 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 ODC1P11926 461 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 ALG10Q5BKT4 473 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SPANXN3Q5MJ09 141 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MKL1Q969V6 931 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 USP18Q9UMW8 372 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MPZL2O60487 215 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 RRM1P23921 792 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 TCF7P36402 384 aaPredicted RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 C15orf40Q8WUR7 153 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CYB5AP00167 134 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CYP1A1P04798 512 aaPredicted RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 CRATP43155 626 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CDC42EP4Q9H3Q1 356 aaKnown RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 ANKZF1Q9H8Y5 726 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CCNB2O95067 398 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 RGS6P49758 472 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 TAS2R41P59536 307 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 ZSWIM1Q9BR11 485 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MTIF3Q9H2K0 278 aaKnown RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CDK16Q00536 496 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MFSD14CQ5VZR4 134 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 STK40Q8N2I9 435 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 MREGQ8N565 214 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SCGB3A2Q96PL1 93 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 CDH19Q9H159 772 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 RDH8Q9NYR8 311 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 NAGPAQ9UK23 515 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SH3D21A4FU49 640 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SLC30A4O14863 429 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 F9P00740 461 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 PET100P0DJ07 73 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 PEPDP12955 493 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 HOXB8P17481 243 aaPredicted RBP13.56□□□□□ -0.24
USP49-203ENST00000394253 S100PP25815 95 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 ADORA1P30542 326 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SQLEQ14534 574 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SLC45A4Q5BKX6 768 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 GTF2IRD2BQ6EKJ0 949 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 PTCHD4Q6ZW05 846 aa13.56□□□□□ -0.24
USP49-203ENST00000394253 SLFN11Q7Z7L1 901 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms