RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TBC1D3DA0A087WVF3 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3IA0A087WXS9 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3EA0A087X179 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3KA0A087X1G2 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3FA6NER0 549 aaPredicted RBP31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3LB9A6J9 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 KPNA3O00505 521 aaPredicted RBP31.36■■■□□ 2.61
CMTM4-202ENST00000394106 PRPSAP2O60256 369 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 ZNF821O75541 412 aaPredicted RBP31.36■■■□□ 2.61
CMTM4-202ENST00000394106 KCNK5O95279 499 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3HP0C7X1 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 MIPP30301 263 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 CA9Q16790 459 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 ERMARDQ5T6L9 678 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3GQ6DHY5 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3CQ6IPX1 549 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 DPY19L3Q6ZPD9 716 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 TBC1D3Q8IZP1 549 aaPredicted RBP31.36■■■□□ 2.61
CMTM4-202ENST00000394106 PCDH20Q8N6Y1 951 aaKnown RBP31.36■■■□□ 2.61
CMTM4-202ENST00000394106 SNRNP25Q9BV90 132 aaKnown RBP31.36■■■□□ 2.61
CMTM4-202ENST00000394106 ZDHHC5Q9C0B5 715 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 IL36AQ9UHA7 158 aa31.36■■■□□ 2.61
CMTM4-202ENST00000394106 A0A1B0GVT2 93 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 FGF10O15520 208 aaPredicted RBP31.35■■■□□ 2.61
CMTM4-202ENST00000394106 SLC7A4O43246 635 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 CD160O95971 181 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 PRNPP04156 253 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 NOVA1P51513 510 aaKnown RBP31.35■■■□□ 2.61
CMTM4-202ENST00000394106 GEMIN4P57678 1058 aaKnown RBP31.35■■■□□ 2.61
CMTM4-202ENST00000394106 TEAD4Q15561 434 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 CCDC122Q5T0U0 273 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 PSAPL1Q6NUJ1 521 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 TMIEQ8NEW7 156 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 ORAI3Q9BRQ5 295 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 NOL6Q9H6R4 1146 aaKnown RBP31.35■■■□□ 2.61
CMTM4-202ENST00000394106 PLXNA2O75051 1894 aa31.35■■■□□ 2.61
CMTM4-202ENST00000394106 CACNA1EQ15878 2313 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 A0A1W2PPC4 97 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 EEF2KO00418 725 aaKnown RBP31.34■■■□□ 2.61
CMTM4-202ENST00000394106 KDELR3O43731 214 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 LRCH4O75427 683 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 TRIM14Q14142 442 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 CARD16Q5EG05 197 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 ARSIQ5FYB1 569 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 AGBL4Q5VU57 503 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 ALKBH5Q6P6C2 394 aaKnown RBP31.34■■■□□ 2.61
CMTM4-202ENST00000394106 LAYNQ6UX15 382 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 FAM131CQ96AQ9 280 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 TM6SF2Q9BZW4 377 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 DYRK4Q9NR20 520 aa31.34■■■□□ 2.61
CMTM4-202ENST00000394106 ASCC3Q8N3C0 2202 aaKnown RBP31.33■■■□□ 2.61
CMTM4-202ENST00000394106 WASH4PA8MWX3 477 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 RNF103O00237 685 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 PLRG1O43660 514 aaKnown RBP31.33■■■□□ 2.61
CMTM4-202ENST00000394106 BUB1O43683 1085 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 HTR7P34969 479 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 EIF4A3P38919 411 aaKnown RBP31.33■■■□□ 2.61
CMTM4-202ENST00000394106 CCR5P51681 352 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 PPP2CBP62714 309 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 PPP2CAP67775 309 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 BNC1Q01954 994 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 VSTM4Q8IW00 320 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 RYBPQ8N488 228 aaPredicted RBP31.33■■■□□ 2.61
CMTM4-202ENST00000394106 ARRDC3Q96B67 414 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 HMCESQ96FZ2 354 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 KCTD15Q96SI1 283 aaPredicted RBP31.33■■■□□ 2.61
CMTM4-202ENST00000394106 EBF2Q9HAK2 575 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 OSGEPQ9NPF4 335 aa31.33■■■□□ 2.61
CMTM4-202ENST00000394106 DNAAF2Q9NVR5 837 aaKnown RBP31.33■■■□□ 2.61
CMTM4-202ENST00000394106 CXorf51AA0A1B0GTR3 108 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 RASA4BC9J798 803 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 GIPC1O14908 333 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 RASA4O43374 803 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 LEFTY1O75610 366 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 HNRNPH3P31942 346 aaKnown RBP31.32■■■□□ 2.6
CMTM4-202ENST00000394106 CCNHP51946 323 aaPredicted RBP31.32■■■□□ 2.6
CMTM4-202ENST00000394106 PPP6R3Q5H9R7 873 aaPredicted RBP31.32■■■□□ 2.6
CMTM4-202ENST00000394106 ADAT2Q7Z6V5 191 aaKnown RBP31.32■■■□□ 2.6
CMTM4-202ENST00000394106 DEFB124Q8NES8 71 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 SLC6A18Q96N87 628 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 HEPHQ9BQS7 1158 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 NUP85Q9BW27 656 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 KLC2Q9H0B6 622 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 WASF2Q9Y6W5 498 aa31.32■■■□□ 2.6
CMTM4-202ENST00000394106 EIF3CLB5ME19 914 aaKnown RBP31.31■■■□□ 2.6
CMTM4-202ENST00000394106 DAPK3O43293 454 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 TPM1P09493 284 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 GRIA4P48058 902 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 YBEYP58557 167 aaPredicted RBP31.31■■■□□ 2.6
CMTM4-202ENST00000394106 CYP4V2Q6ZWL3 525 aaPredicted RBP31.31■■■□□ 2.6
CMTM4-202ENST00000394106 UMODL1-AS1Q8N2C9 162 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 OR8K1Q8NGG5 319 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 ISG20Q96AZ6 181 aaKnown RBP31.31■■■□□ 2.6
CMTM4-202ENST00000394106 BTBD6Q96KE9 485 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 EIF3CQ99613 913 aaKnown RBP31.31■■■□□ 2.6
CMTM4-202ENST00000394106 NCAPGQ9BPX3 1015 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 KDM4CQ9H3R0 1056 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 ZDHHC6Q9H6R6 413 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 GAREM1Q9H706 876 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 IL21RQ9HBE5 538 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms