RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NT5MQ9NPB1 228 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 VPS45Q9NRW7 570 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 SOX13Q9UN79 622 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 RPS6KL1Q9Y6S9 549 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 C5orf67F2Z3F1 127 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 HDCP19113 662 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 GBP2P32456 591 aaPredicted RBP11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 SERPINB9P50453 376 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 CERCAMQ5T4B2 595 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 TMCO4Q5TGY1 634 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 TXNDC8Q6A555 127 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 RTL10Q7L3V2 364 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 ARL14EPQ8N8R7 260 aaPredicted RBP11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 IPMKQ8NFU5 416 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 SPPL3Q8TCT6 385 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 ADAMTS19Q8TE59 1207 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 DENND1AQ8TEH3 1009 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 MRPS31Q92665 395 aaKnown RBP11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 MTBPQ96DY7 904 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 MRGPRX2Q96LB1 330 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF317Q96PQ6 595 aaPredicted RBP11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 CCT8L2Q96SF2 557 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 TLR9Q9NR96 1032 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 SMPD4Q9NXE4 827 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 FAM169AQ9Y6X4 670 aa11.64□□□□□ -0.55
SMARCAL1-203ENST00000392128 HELZP42694 1942 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 MYLKQ15746 1914 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 ILVBLA1L0T0 632 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 HIDE1A8MVS5 230 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 NDUFAB1O14561 156 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 GREM1O60565 184 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 SPAG7O75391 227 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 KRT38O76015 456 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 C1RP00736 705 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 MT-ND3P03897 115 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 SNRPAP09012 282 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 SYN1P17600 705 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 PFKLP17858 780 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 CNTFP26441 200 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 HOXD9P28356 352 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 CDC25CP30307 473 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 SGSHP51688 502 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 MGAT5Q09328 741 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 ARMC3Q5W041 872 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 DENND5AQ6IQ26 1287 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 KDELC1Q6UW63 502 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 RANBP10Q6VN20 620 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 Q6ZNB5 142 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 MGARPQ8TDB4 240 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 POF1BQ8WVV4 589 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 DYDC1Q8WWB3 177 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 TADA1Q96BN2 335 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 CHMP6Q96FZ7 201 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 CERS2Q96G23 380 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 FCRL3Q96P31 734 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 FICDQ9BVA6 458 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 FSD1LQ9BXM9 530 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 TBC1D30Q9Y2I9 924 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 CPQQ9Y646 472 aa11.63□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 A0A0D9SEW6 157 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZCWPW2A0A1B0GU75 182 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ATP9BO43861 1147 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 UGT1A9O60656 530 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZWINTO95229 277 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 DNAJB1P25685 340 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 CLCN4P51793 760 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC7A9P82251 487 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC18A2Q05940 514 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF177Q13360 481 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 LRRC14Q15048 493 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ANKRD20A4Q4UJ75 823 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 SH2D5Q6ZV89 423 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 FAM217AQ8IXS0 508 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 UNC5BQ8IZJ1 945 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 BANPQ8N9N5 519 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 OR52K2Q8NGK3 314 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF669Q96BR6 464 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 UGT1A7Q9HAW7 530 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 UGT1A10Q9HAW8 530 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 UGT1A8Q9HAW9 530 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ATP13A1Q9HD20 1204 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 TRIM49D1C9J1S8 452 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 GFRA2O00451 464 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 KDELR3O43731 214 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 PMPCBO75439 489 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ASMTLO95671 621 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 RHOCP08134 193 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 MMP2P08253 660 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 TPH1P17752 444 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 CA4P22748 312 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms