RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 ZNF33AQ06730 810 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 SLC20A2Q08357 652 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 DPYSL3Q14195 570 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
C11orf88-202ENST00000375618 HADHQ16836 314 aaKnown RBP16.28■□□□□ 0.2
C11orf88-202ENST00000375618 PARP15Q460N3 678 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 KIAA2013Q8IYS2 634 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 OR8D1Q8WZ84 308 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 RAPGEF5Q92565 580 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 ZNF419Q96HQ0 510 aaPredicted RBP16.28■□□□□ 0.2
C11orf88-202ENST00000375618 HSPA12BQ96MM6 686 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 BAG1Q99933 345 aaPredicted RBP16.28■□□□□ 0.2
C11orf88-202ENST00000375618 TM6SF2Q9BZW4 377 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 LACRTQ9GZZ8 138 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 C6orf106Q9H6K1 298 aaPredicted RBP16.28■□□□□ 0.2
C11orf88-202ENST00000375618 RXFP3Q9NSD7 469 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 SEMA4GQ9NTN9 838 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 FBXL12Q9NXK8 326 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 DUSP10Q9Y6W6 482 aa16.28■□□□□ 0.2
C11orf88-202ENST00000375618 CEP192Q8TEP8 1941 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 EP300Q09472 2414 aaPredicted RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 BUB1O43683 1085 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 BUB1BO60566 1050 aaPredicted RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 PRAMEF11O60813 436 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 C5AR1P21730 350 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 MAOBP27338 520 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 OXTRP30559 389 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 CHRNA3P32297 505 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 ARL4AP40617 200 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 ZNF135P52742 658 aaPredicted RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 HADHBP55084 474 aaKnown RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 CYTH1Q15438 398 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 ATXN7L2Q5T6C5 722 aaPredicted RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 LYSMD4Q5XG99 296 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 CYP2U1Q7Z449 544 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 HDDC3Q8N4P3 179 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 OR6K2Q8NGY2 324 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 PCDH19Q8TAB3 1148 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 PIP4K2CQ8TBX8 421 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 FAM131CQ96AQ9 280 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 ARRDC3Q96B67 414 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 LHX3Q9UBR4 397 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 PCDHGA5Q9Y5G8 931 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.27■□□□□ 0.2
C11orf88-202ENST00000375618 WASF2Q9Y6W5 498 aa16.27■□□□□ 0.2
C11orf88-202ENST00000375618 FAM186AA6NE01 2351 aa16.27■□□□□ 0.19
C11orf88-202ENST00000375618 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 NUP205Q92621 2012 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 GVINP1Q7Z2Y8 2422 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 CXorf51AA0A1B0GTR3 108 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 C3orf70A6NLC5 250 aaPredicted RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 DFFAO00273 331 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 ALOX15BO15296 676 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 NDUFS2O75306 463 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 RNASEH2AO75792 299 aaKnown RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 COMTP21964 271 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 ARHGAP25P42331 645 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 DNA2P51530 1060 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 CCNHP51946 323 aaPredicted RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 CNTN1Q12860 1018 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 KRT81Q14533 505 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 SPA17Q15506 151 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 CSRP2Q16527 193 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 TTC31Q49AM3 519 aaPredicted RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 CARD16Q5EG05 197 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 SPDYCQ5MJ68 293 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 USP30Q70CQ3 517 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 PCDH20Q8N6Y1 951 aaKnown RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 PQLC3Q8N755 202 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 GRIN3AQ8TCU5 1115 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 GANCQ8TET4 914 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 PIGKQ92643 395 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 ISG20Q96AZ6 181 aaKnown RBP16.26■□□□□ 0.19
C11orf88-202ENST00000375618 FAF2Q96CS3 445 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 DESI2Q9BSY9 194 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 FSCN3Q9NQT6 498 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 PILRBQ9UKJ0 227 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 HPCAL4Q9UM19 191 aa16.26■□□□□ 0.19
C11orf88-202ENST00000375618 METTL12A8MUP2 240 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 MFSD11O43934 449 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 LEFTY1O75610 366 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 SEMA4FO95754 770 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 PEX11BO96011 259 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 ADH1BP00325 375 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
C11orf88-202ENST00000375618 RGRP47804 291 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 ARSIQ5FYB1 569 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 AGBL4Q5VU57 503 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 PEAR1Q5VY43 1037 aaPredicted RBP16.25■□□□□ 0.19
C11orf88-202ENST00000375618 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.25■□□□□ 0.19
C11orf88-202ENST00000375618 KCTD6Q8NC69 237 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 ORAI3Q9BRQ5 295 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 CALN1Q9BXU9 219 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 BTBD1Q9H0C5 482 aa16.25■□□□□ 0.19
C11orf88-202ENST00000375618 RCOR3Q9P2K3 495 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms