RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GMNNO75496 209 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 F2P00734 622 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ASGR1P07306 291 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 DCKP27707 260 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 SLC1A6P48664 564 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 THOP1P52888 689 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 IKBKEQ14164 716 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 OXA1LQ15070 435 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 SF3B4Q15427 424 aaKnown RBP eCLIP12.35□□□□□ -0.432e-8■■□□□ 13.7
C9orf3-203ENST00000375315 DUOXA2Q1HG44 320 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ZACNQ401N2 412 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ZPBP2Q6X784 338 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 NDUFAF2Q8N183 169 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 SIX6OS1Q8N1H7 587 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 MINDY2Q8NBR6 621 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ADAMTS16Q8TE57 1224 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 CDRT15Q96T59 188 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 COQ10BQ9H8M1 238 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 SIAEQ9HAT2 523 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 CNTNAP2Q9UHC6 1331 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TRIM64CA6NLI5 447 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 KLHL41O60662 606 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 CRHR1P34998 444 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 KLF10Q13118 480 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 KCNA10Q16322 511 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 FASTKD1Q53R41 847 aaKnown RBP12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TWF2Q6IBS0 349 aaKnown RBP12.34□□□□□ -0.43
C9orf3-203ENST00000375315 SPOCD1Q6ZMY3 1216 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 ITIH5Q86UX2 942 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 PHTF2Q8N3S3 785 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 UBR7Q8N806 425 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 KYQ8NBH2 561 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 RSAD2Q8WXG1 361 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 WNT8BQ93098 351 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 MROQ9BYG7 248 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 RIC8BQ9NVN3 520 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM9Q9P0T7 183 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 PRELID1Q9Y255 219 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TSPAN1O60635 241 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 LYPLA1O75608 230 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-203ENST00000375315 CHEK2O96017 543 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TNNC2P02585 160 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 HOXC6P09630 235 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 P4HA1P13674 534 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 PURAQ00577 322 aaKnown RBP12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-203ENST00000375315 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 TAB3Q8N5C8 712 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-203ENST00000375315 FAM47BQ8NA70 645 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF778Q96MU6 729 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 ANKRD60Q9BZ19 345 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 CDH19Q9H159 772 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 SACM1LQ9NTJ5 587 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 VPS28Q9UK41 221 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
C9orf3-203ENST00000375315 DYTNA2CJ06 578 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PMM2O15305 246 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TMEM63AO94886 807 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PTPN1P18031 435 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 CD247P20963 164 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ME2P23368 584 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TRAF2Q12933 501 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 E2F2Q14209 437 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF699Q32M78 642 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 LSM12Q3MHD2 195 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ATP13A4Q4VNC1 1196 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF618Q5T7W0 954 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TEDDM1Q5T9Z0 273 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 IGFN1Q86VF2 1251 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 MMAAQ8IVH4 418 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 CADM3Q8N126 398 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ZNF786Q8N393 782 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 CPSF3Q9UKF6 684 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 CPQQ9Y646 472 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 NRCAMQ92823 1304 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 MEIS3P2A8K0S8 358 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 GAS2O43903 313 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 RFPL1O75677 317 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 RNASEH2AO75792 299 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 ENDOUP21128 410 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 MAP4P27816 1152 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 EIF3EP60228 445 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 BASP1P80723 227 aaKnown RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 GNA12Q03113 381 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 TIGD2Q4W5G0 525 aa12.33□□□□□ -0.44
C9orf3-203ENST00000375315 GDF6Q6KF10 455 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-203ENST00000375315 PPP1R2P3Q6NXS1 205 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms