RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 FBXW8Q8N3Y1 598 aa17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 BRI3BPQ8WY22 251 aa17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 LRGUKQ96M69 825 aa17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 KCTD15Q96SI1 283 aaPredicted RBP17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 NRDE2Q9H7Z3 1164 aa17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 SCHIP1Q9P0W5 487 aaPredicted RBP17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 ITGA11Q9UKX5 1188 aa17.6■□□□□ 0.41
LDLRAP1-201ENST00000374338 TMX2-CTNND1H3BSU7 103 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 KCNK1O00180 336 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 RPS3AP61247 264 aaKnown RBP17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 ADIGQ0VDE8 80 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 CCL14Q16627 93 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 GPR142Q7Z601 462 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 EME1Q96AY2 570 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 RHOBTB2Q9BYZ6 727 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 PNPOQ9NVS9 261 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 GIN1Q9NXP7 522 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 AP4E1Q9UPM8 1137 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 SIN3BO75182 1162 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 GNL1P36915 607 aaPredicted RBP17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 NDST2P52849 883 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 INCA1Q0VD86 236 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 SEPT6Q14141 434 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 PPP2R5DQ14738 602 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 SGF29Q96ES7 293 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 CYP3A43Q9HB55 503 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 SORCS3Q9UPU3 1222 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 RNF11Q9Y3C5 154 aa17.59■□□□□ 0.41
LDLRAP1-201ENST00000374338 NUP205Q92621 2012 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 WDR27A2RRH5 827 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 ATICP31939 592 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 L1CAMP32004 1257 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 CTBSQ01459 385 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 SYPL2Q5VXT5 272 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 UNC5AQ6ZN44 842 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 IFNLR1Q8IU57 520 aaPredicted RBP17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 TFB1MQ8WVM0 346 aaKnown RBP17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 KBTBD7Q8WVZ9 684 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 KATNBL1Q9H079 304 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 COPS7BQ9H9Q2 264 aaPredicted RBP17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 XAB2Q9HCS7 855 aaKnown RBP17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 TTLL3Q9Y4R7 772 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 SQORQ9Y6N5 450 aa17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 ZNF638Q14966 1978 aaKnown RBP17.58■□□□□ 0.41
LDLRAP1-201ENST00000374338 ATP5BP06576 529 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 ADGRE1Q14246 886 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 C9orf57Q5W0N0 161 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 EGFLAMQ63HQ2 1017 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 C16orf87Q6PH81 154 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 MAVSQ7Z434 540 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 PTAR1Q7Z6K3 402 aaPredicted RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 GPR180Q86V85 440 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 CLVS1Q8IUQ0 354 aaPredicted RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 EXOC8Q8IYI6 725 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 DEFB106AQ8N104 65 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 ISOC1Q96CN7 298 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 APOL2Q9BQE5 337 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 E7ESA3 106 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 PSMD12O00232 456 aaPredicted RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 DCXO43602 365 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 DGKIO75912 1065 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 SMIM10L2AP0DMW4 78 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 SMIM10L2BP0DMW5 78 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 PSMC3P17980 439 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 ITGAXP20702 1163 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 CDK18Q07002 472 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 IFRD2Q12894 506 aaPredicted RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 STX3Q13277 289 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 TFDP2Q14188 446 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 ATG16L1Q676U5 607 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 XKR5Q6UX68 686 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 C14orf80Q86SX3 495 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 ADCY4Q8NFM4 1077 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 C12orf43Q96C57 262 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 THAP11Q96EK4 314 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 RIMS3Q9UJD0 308 aa17.58■□□□□ 0.4
LDLRAP1-201ENST00000374338 SMIM28A0A1B0GU29 152 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 RFPL1O75677 317 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 CTSHP09668 335 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 TUBB3Q13509 450 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 CYP2A13Q16696 494 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 EML3Q32P44 896 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 IQCF2Q8IXL9 164 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 CATSPER1Q8NEC5 780 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 TRPC4APQ8TEL6 797 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 LPPQ93052 612 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 KCNK16Q96T55 309 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 POPDC2Q9HBU9 364 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 UBP1Q9NZI7 540 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 NCKIPSDQ9NZQ3 722 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 A0A0G2JMZ2 1700 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 LRRC37A2A6NM11 1700 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 SLC15A5A6NIM6 579 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 FAM47E-STBD1D6RA91 191 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 AQP9O43315 295 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 SULT1C4O75897 302 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 ENDOD1O94919 500 aa17.57■□□□□ 0.4
LDLRAP1-201ENST00000374338 INHBBP09529 407 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms