RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ELL3Q9HB65 397 aaPredicted RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 SPAG4Q9NPE6 437 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ARL15Q9NXU5 204 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 OGDHLQ9ULD0 1010 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PRODHO43272 600 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF806P0C7X5 589 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 NAB1Q13506 487 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ZC3H7AQ8IWR0 971 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TRPV3Q8NET8 790 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 S100ZQ8WXG8 99 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 FAM50BQ9Y247 325 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ERGIC3Q9Y282 383 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 AKAP3O75969 853 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 CDC42P60953 191 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TNK2Q07912 1038 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ALG11Q2TAA5 492 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PERM1Q5SV97 790 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 NEK5Q6P3R8 708 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF549Q6P9A3 640 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF540Q8NDQ6 660 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TRIT1Q9H3H1 467 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 A0A088AWK7 358 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 A0A0X1KG70 313 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 RBAK-RBAKDNI3L0D1 243 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ADCY6O43306 1168 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TSPAN3O60637 253 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PSIP1O75475 530 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF10P21506 573 aaPredicted RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TTKP33981 857 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 COL26A1Q96A83 441 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 DNPEPQ9ULA0 475 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 CORO2BQ9UQ03 480 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 SGTAO43765 313 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 PIK3CGP48736 1102 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ZCCHC9Q8N567 271 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 FAM151AQ8WW52 585 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 TUBA8Q9NY65 449 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 STOML2Q9UJZ1 356 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 NINQ8N4C6 2090 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 TMCC2O75069 709 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 FAM86B2P0C5J1 330 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 CXCL8P10145 99 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 RPL14P50914 215 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 LSM3P62310 102 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 PLD1Q13393 1074 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ABRAQ8N0Z2 381 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 DNAJC1Q96KC8 554 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 FAM126AQ9BYI3 521 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 DMGDHQ9UI17 866 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 RBMX2Q9Y388 322 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 FAM92AA1XBS5 289 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 SNAP91O60641 907 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 CYP1A1P04798 512 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 SREBF1P36956 1147 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 PTDSS1P48651 473 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 CBWD6Q4V339 395 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ATP13A5Q4VNC0 1218 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 PAGE2BQ5JRK9 111 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 COLGALT2Q8IYK4 626 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ATG4CQ96DT6 458 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 GMPPBQ9Y5P6 360 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ZSCAN5CA6NGD5 496 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 A8MX80 341 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 TCF4P15884 667 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 NDST1P52848 882 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 POLR2LP62875 67 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ELF3P78545 371 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 GPAT3Q53EU6 434 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 SLC41A1Q8IVJ1 513 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 FBXO16Q8IX29 292 aaPredicted RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 OFCC1Q8IZS5 231 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ADAM32Q8TC27 787 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 PHF10Q8WUB8 498 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 CRELD1Q96HD1 420 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 KBTBD4Q9NVX7 518 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 EMC3Q9P0I2 261 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 MLXQ9UH92 298 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 NTSP30990 170 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 MPP2Q14168 576 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 HYIQ5T013 277 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 ARMC8Q8IUR7 673 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 BTBD9Q96Q07 612 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 IL22Q9GZX6 179 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 AGO4Q9HCK5 861 aaKnown RBP12.6□□□□□ -0.39
HCFC1-202ENST00000369984 MYL9P24844 172 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 SLC26A3P40879 764 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 USP46P62068 366 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 NFIAQ12857 509 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 TBATAQ96M53 351 aa12.6□□□□□ -0.39
HCFC1-202ENST00000369984 RHOBTB2Q9BYZ6 727 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms