RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 FRS2Q8WU20 508 aa15.83■□□□□ 0.13
TRIM13-201ENST00000356017 OSBPL9Q96SU4 736 aa15.83■□□□□ 0.13
TRIM13-201ENST00000356017 HERPUD2Q9BSE4 406 aa15.83■□□□□ 0.13
TRIM13-201ENST00000356017 SPATA6Q9NWH7 488 aaPredicted RBP15.83■□□□□ 0.13
TRIM13-201ENST00000356017 FARP1Q9Y4F1 1045 aaPredicted RBP15.83■□□□□ 0.13
TRIM13-201ENST00000356017 HACD1B0YJ81 288 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 K7ERQ8 282 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 MATN3O15232 486 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 MTSS1O43312 755 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 SMAD6O43541 496 aaKnown RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 ZNF189O75820 626 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 PAPSS2O95340 614 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 HLA-EP13747 358 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 PECAM1P16284 738 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 RECQLP46063 649 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 CAMK2GQ13555 558 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 HNRNPDQ14103 355 aaKnown RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 LBRQ14739 615 aaKnown RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 NOMO1Q15155 1222 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 MARC1Q5VT66 337 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 PAPD7Q5XG87 772 aaKnown RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 C22orf39Q6P5X5 142 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 LEKR1Q6ZMV7 388 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 NYAP1Q6ZVC0 841 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 PLPP6Q8IY26 295 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 CCDC13Q8IYE1 715 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 CAMKK1Q8N5S9 505 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 DTWD2Q8NBA8 298 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 ACTL9Q8TC94 416 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 TFB1MQ8WVM0 346 aaKnown RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 PTPRN2Q92932 1015 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 HAUS1Q96CS2 278 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 NAP1L3Q99457 506 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 LGMNQ99538 433 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 FERMT1Q9BQL6 677 aa15.83■□□□□ 0.12
TRIM13-201ENST00000356017 FRMD8P1Q9BZ68 369 aaPredicted RBP15.83■□□□□ 0.12
TRIM13-201ENST00000356017 CHD5Q8TDI0 1954 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 A0A1W2PQF6 199 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 MCF2LO15068 1137 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 LAMTOR5O43504 91 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 ALDH1A2O94788 518 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 TMCC1O94876 653 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 FGGP02679 453 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 CASQ1P31415 396 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 HSPA9P38646 679 aaKnown RBP15.82■□□□□ 0.12
TRIM13-201ENST00000356017 OTUD4Q01804 1114 aaKnown RBP15.82■□□□□ 0.12
TRIM13-201ENST00000356017 AP1B1Q10567 949 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 ELAVL3Q14576 367 aaKnown RBP15.82■□□□□ 0.12
TRIM13-201ENST00000356017 ZC3H18Q86VM9 953 aaKnown RBP15.82■□□□□ 0.12
TRIM13-201ENST00000356017 ZSCAN30Q86W11 494 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 C1orf210Q8IVY1 113 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 RASGEF1CQ8N431 466 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 ZNF366Q8N895 744 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 PRSS16Q9NQE7 514 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 SEPT3Q9UH03 358 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 TTC7AQ9ULT0 858 aaPredicted RBP15.82■□□□□ 0.12
TRIM13-201ENST00000356017 FCF1Q9Y324 198 aaKnown RBP15.82■□□□□ 0.12
TRIM13-201ENST00000356017 ACTL7AQ9Y615 435 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 SAR1BQ9Y6B6 198 aa15.82■□□□□ 0.12
TRIM13-201ENST00000356017 KIF2AO00139 706 aaPredicted RBP15.81■□□□□ 0.12
TRIM13-201ENST00000356017 RNASEH1O60930 286 aaKnown RBP15.81■□□□□ 0.12
TRIM13-201ENST00000356017 NEBLO76041 1014 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 PEX11BO96011 259 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 CCNB1P14635 433 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 RHOAP61586 193 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 SNRPD1P62314 119 aaKnown RBP15.81■□□□□ 0.12
TRIM13-201ENST00000356017 LONRF2Q1L5Z9 754 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 C9orf64Q5T6V5 341 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 TMEM92Q6UXU6 159 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 Q6ZVU0 165 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 DSG4Q86SJ6 1040 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 TSTD1Q8NFU3 115 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 MAML1Q92585 1016 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 C16orf45Q96MC5 204 aaPredicted RBP15.81■□□□□ 0.12
TRIM13-201ENST00000356017 PSKH2Q96QS6 385 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 CINPQ9BW66 212 aaPredicted RBP15.81■□□□□ 0.12
TRIM13-201ENST00000356017 HOMER3Q9NSC5 361 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 AMACRQ9UHK6 382 aa15.81■□□□□ 0.12
TRIM13-201ENST00000356017 H7C0C1 242 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 ALOX15BO15296 676 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 SIN3BO75182 1162 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 ZNF821O75541 412 aaPredicted RBP15.8■□□□□ 0.12
TRIM13-201ENST00000356017 GSRP00390 522 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 RBP3P10745 1247 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 MMP13P45452 471 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 ATP5OP48047 213 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 EIF3EP60228 445 aaKnown RBP15.8■□□□□ 0.12
TRIM13-201ENST00000356017 NSUN2Q08J23 767 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRIM13-201ENST00000356017 SLC10A7Q0GE19 358 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 ZNF235Q14590 738 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 PRKD1Q15139 912 aaPredicted RBP15.8■□□□□ 0.12
TRIM13-201ENST00000356017 CYTH1Q15438 398 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 SLC45A4Q5BKX6 768 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 CARD16Q5EG05 197 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 SYT10Q6XYQ8 523 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 CDKL3Q8IVW4 592 aaPredicted RBP15.8■□□□□ 0.12
TRIM13-201ENST00000356017 TEX26Q8N6G2 289 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 OR2AP1Q8NGE2 309 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 OR2A12Q8NGT7 310 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 OR2T3Q8NH03 318 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms