RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 BBS12Q6ZW61 710 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 STK40Q8N2I9 435 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 MDGA1Q8NFP4 955 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 OR6K2Q8NGY2 324 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 EXOC2Q96KP1 924 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 WDR24Q96S15 920 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 SUN2Q9UH99 717 aa18.21■□□□□ 0.51
PDLIM7-202ENST00000355841 EDDM13A0A1B0GTR0 161 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 ZSCAN5CA6NGD5 496 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 PEX11BO96011 259 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 VASPP50552 380 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 COPAP53621 1224 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 GEMIN4P57678 1058 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 SLC10A7Q0GE19 358 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 ANGPT1Q15389 498 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 CYTH1Q15438 398 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 ATXN7L2Q5T6C5 722 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 ADAT2Q7Z6V5 191 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 P3H4Q92791 437 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 POLMQ9NP87 494 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 KCND1Q9NSA2 647 aa18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 BCCIPQ9P287 314 aaKnown RBP eCLIP18.2■□□□□ 0.5
PDLIM7-202ENST00000355841 ZNF318Q5VUA4 2279 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 GALR2O43603 387 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 GABRG2P18507 467 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 NDUFV2P19404 249 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 MX2P20592 715 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 TGM2P21980 687 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 CLCN6P51797 869 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 SEL1L2Q5TEA6 688 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 ZC3H18Q86VM9 953 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 PGBD3Q8N328 593 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 TSEN2Q8NCE0 465 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 CHST14Q8NCH0 376 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 OR2A12Q8NGT7 310 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 ZNF419Q96HQ0 510 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 OLFM3Q96PB7 478 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 TPSD1Q9BZJ3 242 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 C10orf88Q9H8K7 445 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 PRDM16Q9HAZ2 1276 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 EFR3BQ9Y2G0 817 aa18.19■□□□□ 0.5
PDLIM7-202ENST00000355841 TJP3O95049 919 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 PAPSS2O95340 614 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 APBB3O95704 486 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 TDGF1P13385 188 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 GKP32189 559 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 RHOAP61586 193 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 AP1B1Q10567 949 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 LBRQ14739 615 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 INO80DQ53TQ3 878 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 DPY19L3Q6ZPD9 716 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 MRGPRX1Q96LB2 322 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 FAM129BQ96TA1 746 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 CEP44Q9C0F1 390 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 CARD9Q9H257 536 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 VPS13AQ96RL7 3174 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 TTC24A2A3L6 582 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 TARSL2A2RTX5 802 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 APOC4-APOC2K7ER74 178 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 KCNK1O00180 336 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 RNF103O00237 685 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 MUSKO15146 869 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 GJB3O75712 270 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 APOC2P02655 101 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 RGRP47804 291 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 NR2C2P49116 596 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 FNTBP49356 437 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 METAP1P53582 386 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 OTUD4Q01804 1114 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 PDK1Q15118 436 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 POM121L1PQ3SYA9 428 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 TMCO4Q5TGY1 634 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 KIAA1324Q6UXG2 1013 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 MMAAQ8IVH4 418 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 RYBPQ8N488 228 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 PCDH20Q8N6Y1 951 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 OR2T3Q8NH03 318 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 ACTL9Q8TC94 416 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 GRIN3AQ8TCU5 1115 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 HDAC11Q96DB2 347 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 CEP41Q9BYV8 373 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 CD93Q9NPY3 652 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 RRAGDQ9NQL2 400 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 LHX3Q9UBR4 397 aa18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 R3HDM2Q9Y2K5 976 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-202ENST00000355841 FANCGO15287 622 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CEP104O60308 925 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CTSLP07711 333 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CCNCP24863 283 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 MSNP26038 577 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 PPIDQ08752 370 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 KLF1Q13351 362 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 HS1BP3Q53T59 392 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CARD16Q5EG05 197 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 SLC13A5Q86YT5 568 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 LRRC49Q8IUZ0 686 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CCDC13Q8IYE1 715 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 PGBD5Q8N414 524 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms