RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 DLX2Q07687 328 aaPredicted RBP17.66■□□□□ 0.42
CLDN4-201ENST00000340958 SLC10A7Q0GE19 358 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 LBRQ14739 615 aaKnown RBP17.66■□□□□ 0.42
CLDN4-201ENST00000340958 KRT71Q3SY84 523 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 MSS51Q4VC12 460 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 DNAAF3Q8N9W5 541 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 PLK2Q9NYY3 685 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 TBC1D14Q9P2M4 693 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 CHMP2BQ9UQN3 213 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 MAD1L1Q9Y6D9 718 aa17.66■□□□□ 0.42
CLDN4-201ENST00000340958 SMIM23A6NLE4 172 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 H3BQ06 376 aaPredicted RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 AGPSO00116 658 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 TBX10O75333 385 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 AP2A1O95782 977 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 SHBGP04278 402 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 NUDT17P0C025 328 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 ELK3P41970 407 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 ADAM15Q13444 863 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 SKIDA1Q1XH10 827 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 CCDC38Q502W7 563 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 TMCO4Q5TGY1 634 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 CASC4Q6P4E1 433 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 ZNF783Q6ZMS7 281 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 ATP11CQ8NB49 1132 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 OR52K2Q8NGK3 314 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 FATE1Q969F0 183 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 EPB41L4BQ9H329 900 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 LRRC40Q9H9A6 602 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 UBA2Q9UBT2 640 aaPredicted RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 VPS28Q9UK41 221 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 DENND4CQ5VZ89 1909 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 A0A087WUV0 522 aaPredicted RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 TLDC2A0PJX2 215 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 E7ESA3 106 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 KDELR3O43731 214 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 SESN2P58004 480 aaPredicted RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 ZNF844Q08AG5 666 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 UBAP2Q5T6F2 1119 aaKnown RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 LRRC8BQ6P9F7 803 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 CAND1Q86VP6 1230 aaKnown RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 CELF5Q8N6W0 485 aaKnown RBP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 ZNF599Q96NL3 588 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 FCRL5Q96RD9 977 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 FSD1LQ9BXM9 530 aa17.65■□□□□ 0.42
CLDN4-201ENST00000340958 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
CLDN4-201ENST00000340958 MLNP12872 115 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 GRIA1P42261 906 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 GEMP55040 296 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 MAXP61244 160 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 GABPB1Q06547 395 aaPredicted RBP17.64■□□□□ 0.41
CLDN4-201ENST00000340958 KCNC3Q14003 757 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 FSCBQ5H9T9 825 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 MPP7Q5T2T1 576 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 NAPEPLDQ6IQ20 393 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 CXorf57Q6NSI4 855 aaKnown RBP17.64■□□□□ 0.41
CLDN4-201ENST00000340958 SPATA22Q8NHS9 363 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 ATXN2LQ8WWM7 1075 aaKnown RBP17.64■□□□□ 0.41
CLDN4-201ENST00000340958 CFAP36Q96G28 342 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 CINPQ9BW66 212 aaPredicted RBP17.64■□□□□ 0.41
CLDN4-201ENST00000340958 LRRC4CQ9HCJ2 640 aa17.64■□□□□ 0.41
CLDN4-201ENST00000340958 PIH1D1Q9NWS0 290 aaKnown RBP17.64■□□□□ 0.41
CLDN4-201ENST00000340958 DOCK6Q96HP0 2047 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 NYNRINQ9P2P1 1898 aaKnown RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 GOLGA8KD6RF30 607 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 SLC9A3R1O14745 358 aaPredicted RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 USP12O75317 370 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 PMPCBO75439 489 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 SYF2O95926 243 aaKnown RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 PEX11BO96011 259 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 MT-CYBP00156 380 aaPredicted RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 OAS2P29728 719 aaKnown RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 CSKP41240 450 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 C3orf62Q6ZUJ4 267 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 LINC00523Q86TU6 105 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 IPMKQ8NFU5 416 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 APOL2Q9BQE5 337 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 MLPHQ9BV36 600 aaPredicted RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 KIF9Q9HAQ2 790 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 CLEC1BQ9P126 229 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 ZC3H7BQ9UGR2 993 aaKnown RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 NFS1Q9Y697 457 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 SDR42E2A6NKP2 422 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 NEDD8-MDP1E9PL57 170 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 IVLP07476 585 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 GLDCP23378 1020 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 ZNF77Q15935 545 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 ANKRD54Q6NXT1 300 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 GPR149Q86SP6 731 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 OR52K1Q8NGK4 314 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 LRRC39Q96DD0 335 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 OXNAD1Q96HP4 312 aaPredicted RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 GORASP1Q9BQQ3 440 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 FEM1AQ9BSK4 669 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 BBS2Q9BXC9 721 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 POLR1EQ9GZS1 481 aaKnown RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 SLC25A51Q9H1U9 297 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms