RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF180Q9UJW8 692 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 EOMESO95936 686 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CSH1P0DML2 217 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CSH2P0DML3 217 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TFE3P19532 575 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 HFE2Q6ZVN8 426 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 LRRC8DQ7L1W4 858 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 DEFB107AQ8IZN7 70 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC138Q96M89 665 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SEMA3CQ99985 751 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 APOL5Q9BWW9 433 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CACNG4Q9UBN1 327 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MYH14Q7Z406 1995 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TCEA3O75764 348 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SMAD3P84022 425 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CAPRIN1Q14444 709 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SLC9A4Q6AI14 798 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MYO1HQ8N1T3 1032 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SPATA22Q8NHS9 363 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TEKT5Q96M29 485 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 GRK4P32298 578 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ARHGDIAP52565 204 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 NCALDP61601 193 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 HS6ST3Q8IZP7 471 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RHOBTB2Q9BYZ6 727 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 NENFQ9UMX5 172 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RAP2CQ9Y3L5 183 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MATN3O15232 486 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF7P17097 686 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 GPX6P59796 221 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SOX4Q06945 474 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ILF2Q12905 390 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PLD1Q13393 1074 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 FAM45BPQ6NSW5 357 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 FAM45AQ8TCE6 357 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CD99L2Q8TCZ2 262 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 EME1Q96AY2 570 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF333Q96JL9 665 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 GID8Q9NWU2 228 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PDE4DIPQ5VU43 2346 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CROCCQ5TZA2 2017 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PIRTP0C851 137 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 YBEYP58557 167 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 GAD2Q05329 585 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SIX1Q15475 284 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RARS2Q5T160 578 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 AGMOQ6ZNB7 445 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RFWD2Q8NHY2 731 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 KCTD13Q8WZ19 329 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MMADHCQ9H3L0 296 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 IL1RL2Q9HB29 575 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 IL1RAPL1Q9NZN1 696 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RGPD2P0DJD1 1756 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CFAP99D6REC4 459 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ATP5BP06576 529 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PROZP22891 400 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 WDR4P57081 412 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TAF10Q12962 218 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TRMT10BQ6PF06 316 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SLC41A1Q8IVJ1 513 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 APLFQ8IW19 511 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 GALNT4Q8N4A0 578 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 HERPUD2Q9BSE4 406 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MRPL46Q9H2W6 279 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CAB39LQ9H9S4 337 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 C4BP0C0L5 1744 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 DNM1LO00429 736 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MT-CYBP00156 380 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 INPP5AQ14642 412 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ZDHHC14Q8IZN3 488 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 FBXO39Q8N4B4 442 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 NAF1Q96HR8 494 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SERAC1Q96JX3 654 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TTPALQ9BTX7 342 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 R3HDMLQ9H3Y0 253 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SSU72Q9NP77 194 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ANLNQ9NQW6 1124 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 IGSF9Q9P2J2 1179 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 FETUBQ9UGM5 382 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 BIRC5O15392 142 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MYL4P12829 197 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 IL10P22301 178 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MAP4P27816 1152 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ECHS1P30084 290 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CLCN5P51795 746 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PLK1P53350 603 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 KCNJ2P63252 427 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 GRM3Q14832 879 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ANKRD6Q9Y2G4 727 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PCDHB12Q9Y5F1 795 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CLUHO75153 1309 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CLASP2O75122 1294 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 AP2A1O95782 977 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 HDCP19113 662 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ACLYP53396 1101 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 USP41Q3LFD5 358 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ACBD5Q5T8D3 534 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MFN1Q8IWA4 741 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 SCAMP5Q8TAC9 235 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CXorf38Q8TB03 319 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms