RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TTC13Q8NBP0 860 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 FRS2Q8WU20 508 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 NSMCE1Q8WV22 266 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 TFB1MQ8WVM0 346 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CASKIN2Q8WXE0 1202 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 ZNF599Q96NL3 588 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 IER2Q9BTL4 223 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 BRD8Q9H0E9 1235 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 C11orf16Q9NQ32 467 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SUN2Q9UH99 717 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 R3HDM2Q9Y2K5 976 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SAR1BQ9Y6B6 198 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 EDDM13A0A1B0GTR0 161 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 H7C0C1 242 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SYNCRIPO60506 623 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 PEX11BO96011 259 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 HOXB2P14652 356 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 VAV1P15498 845 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 PRLRP16471 622 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 COL9A1P20849 921 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 ATP5OP48047 213 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 PPIDQ08752 370 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 XRCC4Q13426 336 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 RFTN1Q14699 578 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 LBRQ14739 615 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 HNRNPA1L2Q32P51 320 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 TMCO4Q5TGY1 634 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 C22orf39Q6P5X5 142 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 Q6ZVU0 165 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SYT13Q7L8C5 426 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 METTL3Q86U44 580 aaKnown RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 RASGEF1CQ8N431 466 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 MAIP1Q8WWC4 291 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CINPQ9BW66 212 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 CEP44Q9C0F1 390 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 TNKS2Q9H2K2 1166 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 SPATA6Q9NWH7 488 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 C2orf42Q9NWW7 574 aa14.34□□□□□ -0.11
APOBEC3B-202ENST00000335760 A0A1W2PQF6 199 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 HACD1B0YJ81 288 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 MCF2LO15068 1137 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 MATN3O15232 486 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 BNIP3LO60238 219 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 GPR37L1O60883 481 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 SIN3BO75182 1162 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 RHOAP61586 193 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF33AQ06730 810 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 SLC10A7Q0GE19 358 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 STARD3Q14849 445 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 PRKD1Q15139 912 aaPredicted RBP14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 CRY1Q16526 586 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 SLC45A4Q5BKX6 768 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 C9orf64Q5T6V5 341 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 MARC1Q5VT66 337 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 KIAA1211LQ6NV74 962 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 DARS2Q6PI48 645 aaKnown RBP14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 PCDH20Q8N6Y1 951 aaKnown RBP14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 ACTRT1Q8TDG2 376 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 MAML1Q92585 1016 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 PTPRN2Q92932 1015 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 FATE1Q969F0 183 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 ISG20Q96AZ6 181 aaKnown RBP14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 QKIQ96PU8 341 aaKnown RBP eCLIP14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 TM6SF2Q9BZW4 377 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 C10orf88Q9H8K7 445 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 SMARCAL1Q9NZC9 954 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 SEPT3Q9UH03 358 aa14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 TTC7AQ9ULT0 858 aaPredicted RBP14.33□□□□□ -0.12
APOBEC3B-202ENST00000335760 TARSL2A2RTX5 802 aaKnown RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 KCNK1O00180 336 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 PGRMC1O00264 195 aaKnown RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 TUBB4AP04350 444 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 RBP3P10745 1247 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 CCNB1P14635 433 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 CXCL12P48061 93 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 RENBPP51606 427 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 SATB1Q01826 763 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 HNRNPDQ14103 355 aaKnown RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF235Q14590 738 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 SIX1Q15475 284 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 CARD16Q5EG05 197 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 TMEM31Q5JXX7 168 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 CDKL3Q8IVW4 592 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 BBS5Q8N3I7 341 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 TEX26Q8N6G2 289 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 C1orf54Q8WWF1 131 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 ATG4AQ8WYN0 398 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF592Q92610 1267 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 CAPZA3Q96KX2 299 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 FRMD8P1Q9BZ68 369 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 PRSS16Q9NQE7 514 aa14.32□□□□□ -0.12
APOBEC3B-202ENST00000335760 LHX3Q9UBR4 397 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms