RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 TCRBV7S2A1N4TA0A589 114 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 K7ESF4 209 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 TDGF1P13385 188 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 CCNCP24863 283 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 DGKEP52429 567 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 ZNF33AQ06730 810 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 RFTN1Q14699 578 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 PRKD1Q15139 912 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 C9orf64Q5T6V5 341 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 TMCO4Q5TGY1 634 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 NYAP1Q6ZVC0 841 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 Q6ZVU0 165 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 METTL3Q86U44 580 aaKnown RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 SLC13A5Q86YT5 568 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 MAML2Q8IZL2 1156 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 PCDH20Q8N6Y1 951 aaKnown RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 MAML1Q92585 1016 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 P3H4Q92791 437 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 HAUS1Q96CS2 278 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 ZNF419Q96HQ0 510 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 LHX3Q9UBR4 397 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 SUN2Q9UH99 717 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 SNX12Q9UMY4 172 aa16.34■□□□□ 0.21
LRRC28-202ENST00000331450 FCF1Q9Y324 198 aaKnown RBP16.34■□□□□ 0.21
LRRC28-202ENST00000331450 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.21
LRRC28-202ENST00000331450 SIN3BO75182 1162 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 CXCR5P32302 372 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 CXCL12P48061 93 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 COPAP53621 1224 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
LRRC28-202ENST00000331450 SLC10A7Q0GE19 358 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 STARD3Q14849 445 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 PDK1Q15118 436 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 CYTH1Q15438 398 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 TIGD7Q6NT04 549 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-202ENST00000331450 BZW1Q7L1Q6 419 aaKnown RBP16.33■□□□□ 0.2
LRRC28-202ENST00000331450 C1orf210Q8IVY1 113 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 PLPP6Q8IY26 295 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 RASGEF1CQ8N431 466 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 OR2A12Q8NGT7 310 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 ACTL9Q8TC94 416 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 VOPP1Q96AW1 172 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 OSBPL9Q96SU4 736 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 LGMNQ99538 433 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 BRD8Q9H0E9 1235 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 SLC8A2Q9UPR5 921 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 ZDBF2Q9HCK1 2354 aa16.33■□□□□ 0.2
LRRC28-202ENST00000331450 CES2O00748 559 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 PPP1R12AO14974 1030 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 MATN3O15232 486 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 HOXA6P31267 233 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 NUBP1P53384 320 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 ETF1P62495 437 aaKnown RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 XRCC4Q13426 336 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 ELAVL3Q14576 367 aaKnown RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 SIX1Q15475 284 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 PAPD7Q5XG87 772 aaKnown RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 RASSF3Q86WH2 238 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 CCDC13Q8IYE1 715 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 TEX26Q8N6G2 289 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 PBKQ96KB5 322 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 QKIQ96PU8 341 aaKnown RBP eCLIP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 PSKH2Q96QS6 385 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 HHIPQ96QV1 700 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 TNKS2Q9H2K2 1166 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
LRRC28-202ENST00000331450 POLMQ9NP87 494 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-202ENST00000331450 CACNA1IQ9P0X4 2223 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 TCRBV21S2A2A0A5A6 115 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 HACD1B0YJ81 288 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 MUSKO15146 869 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 ALOX15BO15296 676 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 LAMTOR5O43504 91 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 SYNCRIPO60506 623 aaKnown RBP16.31■□□□□ 0.2
LRRC28-202ENST00000331450 GSRP00390 522 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 GABRG2P18507 467 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 IFI35P80217 286 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-202ENST00000331450 HNRNPDQ14103 355 aaKnown RBP16.31■□□□□ 0.2
LRRC28-202ENST00000331450 CCDC181Q5TID7 509 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 TTC13Q8NBP0 860 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 CCNYQ8ND76 341 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 TSTD1Q8NFU3 115 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 OR2AP1Q8NGE2 309 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 OR2T3Q8NH03 318 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 SLC35B2Q8TB61 432 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 FAM129BQ96TA1 746 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 IL12RB2Q99665 862 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 TM6SF2Q9BZW4 377 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 MKRN2Q9H000 416 aaKnown RBP16.31■□□□□ 0.2
LRRC28-202ENST00000331450 RSPH9Q9H1X1 276 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-202ENST00000331450 FBXO4Q9UKT5 387 aa16.31■□□□□ 0.2
LRRC28-202ENST00000331450 TTC7AQ9ULT0 858 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-202ENST00000331450 R3HDM2Q9Y2K5 976 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms