RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RAMP2O60895 175 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 SHOX2O60902 331 aaPredicted RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 STK10O94804 968 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 PENKP01210 267 aaPredicted RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 NUMBP49757 651 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 HTR4Q13639 388 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 DHCR24Q15392 516 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 LEXMQ3ZCV2 418 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 FSCBQ5H9T9 825 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 FAM182AQ5T1J6 154 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 MPP7Q5T2T1 576 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 ZBED8Q8IZ13 594 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 FAM83CQ9BQN1 747 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 BBS2Q9BXC9 721 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 EBF3Q9H4W6 596 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 THG1LQ9NWX6 298 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 DONSONQ9NYP3 566 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 TBC1D30Q9Y2I9 924 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 NUMBLQ9Y6R0 609 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 UNC80Q8N2C7 3258 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 NYNRINQ9P2P1 1898 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 ANHXE9PGG2 379 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 H0Y626 953 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 ECI2O75521 394 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 RHOCP08134 193 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 VAV1P15498 845 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 ACVRL1P37023 503 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 GARSP41250 739 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 LMAN1P49257 510 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 PAPOLAP51003 745 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 MAGOHP61326 146 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 ANO4Q32M45 955 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 FNBP1LQ5T0N5 605 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 MTSS1LQ765P7 747 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 CCNYQ8ND76 341 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 CCDC110Q8TBZ0 833 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 MARK1Q9P0L2 795 aa19.13■□□□□ 0.65
EXOSC3-201ENST00000327304 A0A0A0MRY4 1105 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 A0A0D9SEW6 157 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 PSMC3P17980 439 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 TPSB2P20231 275 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 MX2P20592 715 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 ATP5DP30049 168 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 GAD2Q05329 585 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 TNK2Q07912 1038 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 CDH18Q13634 790 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 FASTKD3Q14CZ7 662 aaKnown RBP19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 POLD3Q15054 466 aaPredicted RBP19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 TPSAB1Q15661 275 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 SMAD2Q15796 467 aaKnown RBP19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 SETD3Q86TU7 594 aaPredicted RBP19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 MFN1Q8IWA4 741 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 YAF2Q8IY57 180 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 MCUQ8NE86 351 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 OR7D4Q8NG98 312 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 PYROXD1Q8WU10 500 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 SPATA13Q96N96 652 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 CAPS2Q9BXY5 557 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 PPCSQ9HAB8 311 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 ETNK1Q9HBU6 452 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 HPS4Q9NQG7 708 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 PRDM6Q9NQX0 595 aa19.12■□□□□ 0.65
EXOSC3-201ENST00000327304 E7EVH7 732 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 OPHN1O60890 802 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 TYRP14679 529 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 FDFT1P37268 417 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PPP2R2AP63151 447 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 GNA12Q03113 381 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 TFF2Q03403 129 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 AP1B1Q10567 949 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 SEMA5AQ13591 1074 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PDGFRLQ15198 375 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 LONRF1Q17RB8 773 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PARP15Q460N3 678 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 DNAJC21Q5F1R6 531 aaKnown RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ANKRD20A2Q5SQ80 823 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ANKRD20A1Q5TYW2 823 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ANKRD20A3Q5VUR7 823 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 RNF219Q5W0B1 726 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ARHGEF18Q6ZSZ5 1173 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 RIBC1Q8N443 379 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 TAB3Q8N5C8 712 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ATPAF2Q8N5M1 289 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ATP11CQ8NB49 1132 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 MAFAQ8NHW3 353 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ATP2A3Q93084 1043 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 HDAC11Q96DB2 347 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PHF7Q9BWX1 381 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 CHD5Q8TDI0 1954 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ILVBLA1L0T0 632 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 OTOL1A6NHN0 477 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 NFATC1O95644 943 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ADH5P11766 374 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PHBP35232 272 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 YBEYP58557 167 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PPIDQ08752 370 aaKnown RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 MSS51Q4VC12 460 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 PTCRAQ6ISU1 281 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 CCDC13Q8IYE1 715 aa19.11■□□□□ 0.65
EXOSC3-201ENST00000327304 ARHGEF2Q92974 986 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms