RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
DDX39A-202ENST00000324340 C6orf118Q5T5N4 469 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 KCTD16Q68DU8 428 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF783Q6ZMS7 281 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 ARHGAP36Q6ZRI8 547 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-202ENST00000324340 PPIL6Q8IXY8 311 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 RIN3Q8TB24 985 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 CCDC110Q8TBZ0 833 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 ING5Q8WYH8 240 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 CPT1BQ92523 772 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 MAML1Q92585 1016 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 FMO2Q99518 471 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 FOXP3Q9BZS1 431 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 NSRP1Q9H0G5 558 aaKnown RBP13.01□□□□□ -0.33
DDX39A-202ENST00000324340 MAGEH1Q9H213 219 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 CLEC1BQ9P126 229 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 IGSF9Q9P2J2 1179 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
DDX39A-202ENST00000324340 FAM153AQ9UHL3 310 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 ANAPC5Q9UJX4 755 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 TRHDEQ9UKU6 1024 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 NUP205Q92621 2012 aa13.01□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 ILVBLA1L0T0 632 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TYW5A2RUC4 315 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 PDLIM1O00151 329 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 KCNK1O00180 336 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TRDMT1O14717 391 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 MATN3O15232 486 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 CHADO15335 359 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 ANP32DO95626 131 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 PEX11BO96011 259 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 VIMP08670 466 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 FSHRP23945 695 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 RPS6KA3P51812 740 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 ROR2Q01974 943 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 GNA12Q03113 381 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 CBLBQ13191 982 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF177Q13360 481 aaPredicted RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 SERINC3Q13530 473 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 KCNJ11Q14654 390 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 CBX2Q14781 532 aaPredicted RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 MPPE1Q53F39 396 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TEX44Q53QW1 395 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 CXorf57Q6NSI4 855 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 PIGWQ7Z7B1 504 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 NPAS3Q8IXF0 933 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 ZNF567Q8N184 647 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 CELF5Q8N6W0 485 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 NAT8LQ8N9F0 302 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TDRD5Q8NAT2 981 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 DEPDC1BQ8WUY9 529 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 PRCCQ92733 491 aaPredicted RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 ARHGEF2Q92974 986 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 OTUB2Q96DC9 234 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TMA16Q96EY4 203 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 HMCESQ96FZ2 354 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 IL12RB2Q99665 862 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TXLNGYQ9BZA5 131 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 S1PR5Q9H228 398 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 RABEP2Q9H5N1 569 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 PPANQ9NQ55 473 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 GDE1Q9NZC3 331 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 TBC1D14Q9P2M4 693 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 IPO11Q9UI26 975 aaKnown RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
DDX39A-202ENST00000324340 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
DDX39A-202ENST00000324340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TTC36A6NLP5 189 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 CACNG3O60359 315 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TSPAN3O60637 253 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TBL1XO60907 577 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 METTL18O95568 372 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 CCNB1P14635 433 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 FDFT1P37268 417 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 IL10RBQ08334 325 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ZBTB17Q13105 803 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 SEMA5AQ13591 1074 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 HNRNPDQ14103 355 aaKnown RBP12.99□□□□□ -0.33
DDX39A-202ENST00000324340 LBRQ14739 615 aaKnown RBP12.99□□□□□ -0.33
DDX39A-202ENST00000324340 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 E2F5Q15329 346 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 PARP6Q2NL67 630 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ANO4Q32M45 955 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ARHGEF18Q6ZSZ5 1173 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 RELL1Q8IUW5 271 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ZCCHC9Q8N567 271 aaKnown RBP12.99□□□□□ -0.33
DDX39A-202ENST00000324340 OR52K2Q8NGK3 314 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 FGF13Q92913 245 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TLCD1Q96CP7 247 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TEKT5Q96M29 485 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ASB16Q96NS5 453 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 XPO6Q96QU8 1125 aaKnown RBP12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-202ENST00000324340 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 TRPV4Q9HBA0 871 aa12.99□□□□□ -0.33
DDX39A-202ENST00000324340 ETNK1Q9HBU6 452 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms