RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ZCCHC8Q6NZY4 707 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 CNSTQ6PJW8 725 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 TAF8Q7Z7C8 310 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 OR52K1Q8NGK4 314 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 EPS8L3Q8TE67 593 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 IL22Q9GZX6 179 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 GANQ9H2C0 597 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 IMP3Q9NV31 184 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 TAS2R14Q9NYV8 317 aa10.85□□□□□ -0.67
SYNPO2-201ENST00000307142 OR10H2O60403 315 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 CATP04040 527 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ALPPL2P10696 532 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 PPP2R1BP30154 601 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ZACNQ401N2 412 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 FBXO46Q6PJ61 603 aaPredicted RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 TSTD1Q8NFU3 115 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 OPTCQ9UBM4 332 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 MAGEC1O60732 1142 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 RARAP10276 462 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 MAT2AP31153 395 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 BMPR2Q13873 1038 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ZNF792Q3KQV3 632 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 AFTPHQ6ULP2 937 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 HMGB4Q8WW32 186 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 APOC4-APOC2K7ER74 178 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 NR5A2O00482 541 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 APOC2P02655 101 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 GSTM1P09488 218 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ELK3P41970 407 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 RABGGTBP53611 331 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 LILRA4P59901 499 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 USP4Q13107 963 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 AGBL2Q5U5Z8 902 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 SEL1L3Q68CR1 1132 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 MYO19Q96H55 970 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 PTPRHQ9HD43 1115 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ETNK2Q9NVF9 386 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 IMPDH2P12268 514 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 CCR4P51679 360 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ST3GAL1Q11201 340 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC9A9Q8IVB4 645 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 C2orf15Q8WU43 125 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 TRBV23OR9-2A0A075B6M9 112 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 SEC22BO75396 215 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 RGS1Q08116 209 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 VITQ6UXI7 678 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 TRMT61BQ9BVS5 477 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 DPEP3Q9H4B8 488 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 NCKIPSDQ9NZQ3 722 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ARL2BPQ9Y2Y0 163 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 FGF18O76093 207 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 TTPAP49638 278 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 KLHL35Q6PF15 583 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 LINGO4Q6UY18 593 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC26A11Q86WA9 606 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 VPS50Q96JG6 964 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 HGH1Q9BTY7 390 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 ABCG8Q9H221 673 aa10.84□□□□□ -0.67
SYNPO2-201ENST00000307142 HSD17B3P37058 310 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SCARA3Q6AZY7 606 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CYP4Z1Q86W10 505 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 NETO2Q8NC67 525 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CYGBQ8WWM9 190 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 GTPBP2Q9BX10 602 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 PIF1Q9H611 641 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 PHPT1Q9NRX4 125 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 E9PAM4 449 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 MYO1CO00159 1063 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 INPPL1O15357 1258 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 UGT2B4P06133 528 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 HPCAL1P37235 193 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 DGKGP49619 791 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CRADDP78560 199 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 KATNAL2Q8IYT4 538 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 TADA1Q96BN2 335 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 THTPAQ9BU02 230 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SCOCQ9UIL1 159 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 A0A087X1B8 175 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 LOC100653049A0A140TA62 436 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 RHPN2P1A8MT19 583 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 KRT34O76011 436 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 NFKB1P19838 968 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 ATP6V1C1P21283 382 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 GPR15P49685 360 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 RRP1BQ14684 758 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC41A1Q8IVJ1 513 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 POF1BQ8WVV4 589 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 ARHGAP39Q9C0H5 1083 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 URADA6NGE7 173 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 QSOX1O00391 747 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 GUCY1B2O75343 617 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms