RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 C1orf232A0A0U1RR37 186 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 BUD23O43709 281 aaKnown RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 ITM2AO43736 263 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 LDLRP01130 860 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 FCGR1AP12314 374 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 GPD2P43304 727 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 EFEMP1Q12805 493 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 MFSD14CQ5VZR4 134 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 MIER2Q8N344 545 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 GPR20Q99678 358 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 CYLDQ9NQC7 956 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 TUBGCP6Q96RT7 1819 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 MAP3K13O43283 966 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 HOXC6P09630 235 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 OR1G1P47890 313 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 CLK1P49759 484 aaKnown RBP13.46□□□□□ -0.25
DDX54-201ENST00000306014 SLC25A11Q02978 314 aaKnown RBP13.46□□□□□ -0.25
DDX54-201ENST00000306014 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
DDX54-201ENST00000306014 DLG2Q15700 870 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 STK32CQ86UX6 486 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 ZNF410Q86VK4 478 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
DDX54-201ENST00000306014 NSMCE2Q96MF7 247 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDX54-201ENST00000306014 GATA5Q9BWX5 397 aaPredicted RBP13.46□□□□□ -0.25
DDX54-201ENST00000306014 SEPT3Q9UH03 358 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 TEX264Q9Y6I9 313 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 MDM4O15151 490 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 MAN1A2O60476 641 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 GCATO75600 419 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 TFEBP19484 476 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 BDNFP23560 247 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 TRPC1P48995 793 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 SATL1Q86VE3 508 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 FAM156AQ8NDB6 213 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 DACH2Q96NX9 599 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 RBBP8Q99708 897 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 GPR63Q9BZJ6 419 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 SYTL2Q9HCH5 934 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 DNAJC28Q9NX36 388 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
DDX54-201ENST00000306014 RRN3Q9NYV6 651 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 TUBGCP4Q9UGJ1 667 aa13.46□□□□□ -0.25
DDX54-201ENST00000306014 TK2O00142 265 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 NFKBIEO00221 500 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 IRF6O14896 467 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 VPS26AO75436 327 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 DLDP09622 509 aaKnown RBP13.46□□□□□ -0.26
DDX54-201ENST00000306014 SLC2A3P11169 496 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 PSEN1P49768 467 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 RENBPP51606 427 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 SREBF2Q12772 1141 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 FSTL4Q6MZW2 842 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 GK5Q6ZS86 529 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 ASRGL1Q7L266 308 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 CAMK1DQ8IU85 385 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 MYO1HQ8N1T3 1032 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 FAM81AQ8TBF8 368 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.26
DDX54-201ENST00000306014 MCRS1Q96EZ8 462 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 SENP8Q96LD8 212 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 ZNF512Q96ME7 567 aaPredicted RBP13.46□□□□□ -0.26
DDX54-201ENST00000306014 MUC3BQ9H195 1237 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 SPTLC1O15269 473 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 MSCO60682 206 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 DNAJB2P25686 324 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 TRAF2Q12933 501 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 RALGDSQ12967 914 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 MSLNQ13421 630 aaPredicted RBP13.46□□□□□ -0.26
DDX54-201ENST00000306014 PFKFB4Q16877 469 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 SLC25A52Q3SY17 297 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 FBXO39Q8N4B4 442 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 NAT14Q8WUY8 206 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 LENG1Q96BZ8 264 aaPredicted RBP13.46□□□□□ -0.26
DDX54-201ENST00000306014 PANX3Q96QZ0 392 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 ENTPD7Q9NQZ7 604 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 FBXO5Q9UKT4 447 aa13.46□□□□□ -0.26
DDX54-201ENST00000306014 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 SLC7A2P52569 658 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 CDH13P55290 713 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 MRPS5P82675 430 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 NR6A1Q15406 480 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 STRADAQ7RTN6 431 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 ATP6V0D2Q8N8Y2 350 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 DENND1AQ8TEH3 1009 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 ARHGEF4Q9NR80 690 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 DTLQ9NZJ0 730 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 SCHIP1Q9P0W5 487 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 MYO5AQ9Y4I1 1855 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 BCL10O95999 233 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 POMCP01189 267 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 F7P08709 466 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 LTA4HP09960 611 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 ADORA2AP29274 412 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms