RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 HLA-BQ31612 363 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 POM121L1PQ3SYA9 428 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 TDRD12Q587J7 1177 aaKnown RBP26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 VPS36Q86VN1 386 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 PYROXD2Q8N2H3 581 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 SKA1Q96BD8 255 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 TNKS2Q9H2K2 1166 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 CATSPERBQ9H7T0 1116 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 DYRK4Q9NR20 520 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 CNOT8Q9UFF9 292 aaKnown RBP26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 IL36AQ9UHA7 158 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 ANKRD6Q9Y2G4 727 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 TMEM191CA6NGB0 347 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 PLK4O00444 970 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 KPNA3O00505 521 aaPredicted RBP26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 CREB3O43889 395 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 CTSLP07711 333 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 HTR7P34969 479 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 ZBED6P86452 979 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 AGBL4Q5VU57 503 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 RTL3Q8N8U3 475 aaKnown RBP26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 FNIP1Q8TF40 1166 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 ZNF653Q96CK0 615 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 MRPL47Q9HD33 250 aaKnown RBP26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 IFNKQ9P0W0 207 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 CAPN11Q9UMQ6 739 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 CACNA1EQ15878 2313 aa26.98■■□□□ 1.91
CDKN2A-201ENST00000304494 RNF8O76064 485 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 PMLP29590 882 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 NUDT1P36639 197 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 KIF19Q2TAC6 998 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 DPY19L3Q6ZPD9 716 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 CHST14Q8NCH0 376 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 ISG20Q96AZ6 181 aaKnown RBP26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 PPP1R16AQ96I34 528 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 ISCUQ9H1K1 167 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 IL21RQ9HBE5 538 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 PREBQ9HCU5 417 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 DONSONQ9NYP3 566 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 SNX11Q9Y5W9 270 aa26.97■■□□□ 1.91
CDKN2A-201ENST00000304494 EIF3CLB5ME19 914 aaKnown RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 VILLO15195 856 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 FGF10O15520 208 aaPredicted RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 LATO43561 262 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 ZNF821O75541 412 aaPredicted RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 SERPING1P05155 500 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 DNA2P51530 1060 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 C21orf59P57076 290 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 CARD16Q5EG05 197 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 HGSNATQ68CP4 663 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 PRPF39Q86UA1 669 aaKnown RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 DNAAF5Q86Y56 855 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 GRIN3AQ8TCU5 1115 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 CPLX3Q8WVH0 158 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 SLC6A18Q96N87 628 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 EIF3CQ99613 913 aaKnown RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 EBF2Q9HAK2 575 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 AASDHPPTQ9NRN7 309 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 TM7SF3Q9NS93 570 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 ANGPTL2Q9UKU9 493 aa26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 FCF1Q9Y324 198 aaKnown RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 LUC7L2Q9Y383 392 aaKnown RBP26.96■■□□□ 1.91
CDKN2A-201ENST00000304494 SPTBN2O15020 2390 aa26.95■■□□□ 1.91
CDKN2A-201ENST00000304494 ZSCAN5CA6NGD5 496 aaPredicted RBP26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 WASH4PA8MWX3 477 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 KDELR3O43731 214 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 YBEYP58557 167 aaPredicted RBP26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 PPP2CBP62714 309 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 PPP2CAP67775 309 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 SLC45A4Q5BKX6 768 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 ARSIQ5FYB1 569 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 TRIM69Q86WT6 500 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 ZNF354CQ86Y25 554 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 NAXDQ8IW45 347 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 PLPP6Q8IY26 295 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 SERAC1Q96JX3 654 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 NCAPGQ9BPX3 1015 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 HEPHQ9BQS7 1158 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 AP4E1Q9UPM8 1137 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 FNDC3AQ9Y2H6 1198 aaKnown RBP26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 PCDHGB2Q9Y5G2 931 aa26.95■■□□□ 1.9
CDKN2A-201ENST00000304494 CNOT1A5YKK6 2376 aaKnown RBP26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 ASCC3Q8N3C0 2202 aaKnown RBP26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 SH3BP5O60239 455 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 LEFTY1O75610 366 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 CD160O95971 181 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 CD38P28907 300 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 TPI1P60174 286 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 PARP15Q460N3 678 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 PIP5KL1Q5T9C9 394 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 LAYNQ6UX15 382 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 HDAC8Q9BY41 377 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 DMTF1Q9Y222 760 aa26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.94■■□□□ 1.9
CDKN2A-201ENST00000304494 DFNA5O60443 496 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 CTSKP43235 329 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 CCNHP51946 323 aaPredicted RBP26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 SHC2P98077 582 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 SUZ12Q15022 739 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms