RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 GJA1P17302 382 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 HNRNPDQ14103 355 aaKnown RBP26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 MARC1Q5VT66 337 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 PACS1Q6VY07 963 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 FAM47EQ6ZV65 393 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 MAGEB18Q96M61 343 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 FNIP2Q9P278 1114 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 PLXNA4Q9HCM2 1894 aa26.07■■□□□ 1.76
SDCCAG3-201ENST00000298537 LPXNO60711 386 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 KRT37O76014 449 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 HSPA1AP0DMV8 641 aaKnown RBP26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 HSPA1BP0DMV9 641 aaKnown RBP26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 PPM1AP35813 382 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 CD86P42081 329 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 EPHB3P54753 998 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 ERVFC1P60507 584 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC18A2Q05940 514 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 CGB2Q6NT52 195 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 MARK2Q7KZI7 788 aaKnown RBP26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 ATXN7L3BQ96GX2 97 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC13A1Q9BZW2 595 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLCO1B3Q9NPD5 702 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 MYLKQ15746 1914 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 PDE4DIPQ5VU43 2346 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 MBL2P11226 248 aaPredicted RBP26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 GBP2P32456 591 aaPredicted RBP26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC11A2P49281 568 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 DNAJC3Q13217 504 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 HSP90AA5PQ58FG0 334 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SPANXN3Q5MJ09 141 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 TMEM240Q5SV17 173 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 CYS1Q717R9 158 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 UBE2Q1Q7Z7E8 422 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 LRRC49Q8IUZ0 686 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC25A41Q8N5S1 370 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 ADAMTS19Q8TE59 1207 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 FAM111AQ96PZ2 611 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 TMEM51Q9NW97 253 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 DOCK6Q96HP0 2047 aa26.06■■□□□ 1.76
SDCCAG3-201ENST00000298537 ANXA9O76027 345 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 NEK3P51956 506 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 WNT3AP56704 352 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 IL9RQ01113 521 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 ANO4Q32M45 955 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 C5orf22Q49AR2 442 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 KDELC1Q6UW63 502 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 GAREM2Q75VX8 874 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 TMC7Q7Z402 723 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 CCNJLQ8IV13 435 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 NAT9Q9BTE0 207 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 RXFP1Q9HBX9 757 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 SSU72Q9NP77 194 aaKnown RBP26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 PCMTD2Q9NV79 361 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 ALPK3Q96L96 1907 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 HIDE1A8MVS5 230 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 CXCL14O95715 111 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 RENBPP51606 427 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC18A1P54219 525 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 MGAT5Q09328 741 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 STXBP5Q5T5C0 1151 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 APOPT1Q96IL0 206 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 IL22Q9GZX6 179 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 ZFATQ9P243 1243 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC2A6Q9UGQ3 507 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 SOX13Q9UN79 622 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 FAM169AQ9Y6X4 670 aa26.05■■□□□ 1.76
SDCCAG3-201ENST00000298537 USP1O94782 785 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 DNAJB1P25685 340 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 HOXD9P28356 352 aaPredicted RBP26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 NPY2RP49146 381 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 GEMP55040 296 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 FPGSQ05932 587 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 HHATQ5VTY9 493 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 PIGWQ7Z7B1 504 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 PLD4Q96BZ4 506 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 IMP4Q96G21 291 aaKnown RBP26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 FSD1LQ9BXM9 530 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC25A51Q9H1U9 297 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 E2F8A0AVK6 867 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 MAPKAPK2P49137 400 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 PARP15Q460N3 678 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 RANBP10Q6VN20 620 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 BHMTQ93088 406 aa26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 THOC1Q96FV9 657 aaKnown RBP26.04■■□□□ 1.76
SDCCAG3-201ENST00000298537 FAM237BA0A1B0GVD1 139 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 KRT38O76015 456 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 ZWINTO95229 277 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 ALDOAP04075 364 aaKnown RBP26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 ETV4P43268 484 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 SMAD3P84022 425 aaKnown RBP26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 GKAP1Q5VSY0 366 aaPredicted RBP26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 TEX26Q8N6G2 289 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 ARRDC2Q8TBH0 407 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 SLC22A17Q8WUG5 538 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 PTPRN2Q92932 1015 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 CLP1Q92989 425 aaKnown RBP26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 SRPK1Q96SB4 655 aaKnown RBP26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 SPON2Q9BUD6 331 aa26.03■■□□□ 1.76
SDCCAG3-201ENST00000298537 PDFQ9HBH1 243 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms