RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MYBPC3Q14896 1274 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 PIM2Q9P1W9 311 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 SPTLC1O15269 473 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 LGALS2P05162 132 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 HDCP19113 662 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 DPYSQ14117 519 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 NPWQ8N729 165 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 TMIGD2Q96BF3 282 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 LIN28AQ9H9Z2 209 aaKnown RBP27.91■■■□□ 2.06
CBX4-201ENST00000269397 XPR1Q9UBH6 696 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 VPS28Q9UK41 221 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 DLX3O60479 287 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 NFKB1P19838 968 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 PAFAH1B3Q15102 231 aaKnown RBP27.91■■■□□ 2.06
CBX4-201ENST00000269397 ANO4Q32M45 955 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 MGAT5BQ3V5L5 792 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 SLC7A14Q8TBB6 771 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 SHROOM3Q8TF72 1996 aa27.91■■■□□ 2.06
CBX4-201ENST00000269397 DCLK1O15075 740 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 SLC35E2BP0CK96 405 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 PSMC3P17980 439 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 AKAP5P24588 427 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 GRM5P41594 1212 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 SCNN1BP51168 640 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 UNC93AQ86WB7 457 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 LRTOMTQ8WZ04 291 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 TSNARE1Q96NA8 513 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 COQ10BQ9H8M1 238 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 BCAP29Q9UHQ4 241 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 RNF11Q9Y3C5 154 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 I6L893 689 aaPredicted RBP27.9■■■□□ 2.06
CBX4-201ENST00000269397 ZNF26P17031 533 aaPredicted RBP27.9■■■□□ 2.06
CBX4-201ENST00000269397 RALGDSQ12967 914 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 KYAT1Q16773 422 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 ZNF484Q5JVG2 852 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 ZC3HC1Q86WB0 502 aaKnown RBP27.9■■■□□ 2.06
CBX4-201ENST00000269397 CENPLQ8N0S6 344 aaPredicted RBP27.9■■■□□ 2.06
CBX4-201ENST00000269397 GOLGA2P5Q9HBQ8 144 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 PLK2Q9NYY3 685 aa27.9■■■□□ 2.06
CBX4-201ENST00000269397 XPO1O14980 1071 aaKnown RBP27.89■■■□□ 2.06
CBX4-201ENST00000269397 DGKDQ16760 1214 aa27.89■■■□□ 2.06
CBX4-201ENST00000269397 SETD3Q86TU7 594 aaPredicted RBP27.89■■■□□ 2.06
CBX4-201ENST00000269397 FAM124BQ9H5Z6 455 aaPredicted RBP27.89■■■□□ 2.06
CBX4-201ENST00000269397 KLK14Q9P0G3 267 aa27.89■■■□□ 2.06
CBX4-201ENST00000269397 SNX10Q9Y5X0 201 aa27.89■■■□□ 2.06
CBX4-201ENST00000269397 A0A0G2JMZ2 1700 aa27.89■■■□□ 2.06
CBX4-201ENST00000269397 LRRC37A2A6NM11 1700 aa27.89■■■□□ 2.06
CBX4-201ENST00000269397 PFDN1O60925 122 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 CABYRO75952 493 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 DDHD2O94830 711 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 CYP2B6P20813 491 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 GABRB3P28472 473 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 POU5F1BQ06416 359 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 SH2D4BQ5SQS7 431 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 C9orf57Q5W0N0 161 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 NT5DC4Q86YG4 428 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 IFNLR1Q8IU57 520 aaPredicted RBP27.89■■■□□ 2.05
CBX4-201ENST00000269397 TMEM126BQ8IUX1 230 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 LINC01465Q8N7H1 131 aa27.89■■■□□ 2.05
CBX4-201ENST00000269397 USP2O75604 605 aaPredicted RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 CNMDO75829 334 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 HNRNPLP14866 589 aaKnown RBP eCLIP27.88■■■□□ 2.05
CBX4-201ENST00000269397 NR1H2P55055 460 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 CTBP1Q13363 440 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 KCTD11Q693B1 232 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 RPS27LQ71UM5 84 aaKnown RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 CTU1Q7Z7A3 348 aaKnown RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 DENND6AQ8IWF6 608 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 DLG3Q92796 817 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 NXNL1Q96CM4 212 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 GPR22Q99680 433 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 MCMBPQ9BTE3 642 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 IL22Q9GZX6 179 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 SNX25Q9H3E2 840 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 EPS15L1Q9UBC2 864 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 CEPT1Q9Y6K0 416 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 CDH2P19022 906 aaPredicted RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 ACADSBP45954 432 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 CSE1LP55060 971 aaKnown RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 CYP2R1Q6VVX0 501 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 APOBEC3FQ8IUX4 373 aaKnown RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 MYO1HQ8N1T3 1032 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 MPHOSPH6Q99547 160 aaKnown RBP27.88■■■□□ 2.05
CBX4-201ENST00000269397 SLC2A11Q9BYW1 496 aa27.88■■■□□ 2.05
CBX4-201ENST00000269397 ARHGAP10A1A4S6 786 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 NEMP2A6NFY4 417 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 E7ENX8 843 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 AHSGP02765 367 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 MPP1Q00013 466 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 LRRC8EQ6NSJ5 796 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 CEP97Q8IW35 865 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 STYXQ8WUJ0 223 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 CCT7Q99832 543 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 GTSE1Q9NYZ3 720 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 MID2Q9UJV3 735 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 TADA2AO75478 443 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 TRMUO75648 421 aaKnown RBP27.87■■■□□ 2.05
CBX4-201ENST00000269397 PSME3P61289 254 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 TTLL4Q14679 1199 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 KDM1BQ8NB78 822 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms