RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 MAGEA3P43357 314 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 GEMIN4P57678 1058 aaKnown RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 ITKQ08881 620 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 MSS51Q4VC12 460 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 ATAT1Q5SQI0 421 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 SYCE2Q6PIF2 218 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 OTOP3Q7RTS5 596 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 DCAF4L2Q8NA75 395 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 FBXO36Q8NEA4 188 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 SMARCD2Q92925 531 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 IRF7Q92985 503 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 C2orf49Q9BVC5 232 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 POLR1EQ9GZS1 481 aaKnown RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 VPS45Q9NRW7 570 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 OBP2AQ9NY56 170 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 FAM53CQ9NYF3 392 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 VPS28Q9UK41 221 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 NFS1Q9Y697 457 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 TEX264Q9Y6I9 313 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 A0A087WUV0 522 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 AGPSO00116 658 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 LINC01565O15544 149 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 CPP00450 1065 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 ELK3P41970 407 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 MPP3Q13368 585 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 CEP85LQ5SZL2 805 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 ZNF534Q76KX8 674 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 CCNJLQ8IV13 435 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 ANKMY2Q8IV38 441 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 FGF13Q92913 245 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 BHMTQ93088 406 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 IMP4Q96G21 291 aaKnown RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 GORASP1Q9BQQ3 440 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 NAT9Q9BTE0 207 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 MLPHQ9BV36 600 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 CINPQ9BW66 212 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-216ENST00000259951 APOL5Q9BWW9 433 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 VPS37BQ9H9H4 285 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 OGFRQ9NZT2 677 aa17.03■□□□□ 0.32
HLA-F-216ENST00000259951 CDH23Q9H251 3354 aa17.02■□□□□ 0.32
HLA-F-216ENST00000259951 MYOFQ9NZM1 2061 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 CXorf51AA0A1B0GTR3 108 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 SDR42E2A6NKP2 422 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 PENKP01210 267 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 IVLP07476 585 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 GSTA2P09210 222 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 CES1P23141 567 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 CSKP41240 450 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 STAT4Q14765 748 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 FASTKD3Q14CZ7 662 aaKnown RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 FSCBQ5H9T9 825 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 HP1BP3Q5SSJ5 553 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 GET4Q7L5D6 327 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 KRT222Q8N1A0 295 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 RIN3Q8TB24 985 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 ACDQ96AP0 544 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 E2F7Q96AV8 911 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 OXNAD1Q96HP4 312 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 ZNF419Q96HQ0 510 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 RIPOR3Q96MK2 946 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 ASB16Q96NS5 453 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 SH3GL2Q99962 352 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 TMEM109Q9BVC6 243 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 BBS2Q9BXC9 721 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 ROPN1BQ9BZX4 212 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 ROPN1Q9HAT0 212 aaPredicted RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 TRPV4Q9HBA0 871 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 LRRC4CQ9HCJ2 640 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 BFARQ9NZS9 450 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 MARK1Q9P0L2 795 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 OR51B4Q9Y5P0 310 aa17.02■□□□□ 0.31
HLA-F-216ENST00000259951 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.02■□□□□ 0.31
HLA-F-216ENST00000259951 AVILO75366 819 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 MYZAPP0CAP1 466 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
HLA-F-216ENST00000259951 NPY2RP49146 381 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 PLK1P53350 603 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 ZNF844Q08AG5 666 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 INO80DQ53TQ3 878 aaPredicted RBP17.01■□□□□ 0.31
HLA-F-216ENST00000259951 FAM78AQ5JUQ0 283 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 RETSATQ6NUM9 610 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 METTL3Q86U44 580 aaKnown RBP17.01■□□□□ 0.31
HLA-F-216ENST00000259951 TMEM25Q86YD3 366 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 DNAAF3Q8N9W5 541 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 BPIFB1Q8TDL5 484 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 PSKH2Q96QS6 385 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 FSD1LQ9BXM9 530 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 SLC2A11Q9BYW1 496 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 CASS4Q9NQ75 786 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 DUS2Q9NX74 493 aaKnown RBP17.01■□□□□ 0.31
HLA-F-216ENST00000259951 PLK2Q9NYY3 685 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 CDH7Q9ULB5 785 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 CHMP2BQ9UQN3 213 aa17.01■□□□□ 0.31
HLA-F-216ENST00000259951 GOLGA8KD6RF30 607 aa17■□□□□ 0.31
HLA-F-216ENST00000259951 NEDD8-MDP1E9PL57 170 aa17■□□□□ 0.31
HLA-F-216ENST00000259951 BANF1O75531 89 aa17■□□□□ 0.31
HLA-F-216ENST00000259951 GRIA1P42261 906 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms