RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MCUQ8NE86 351 aa17.82■□□□□ 0.44
SRSF1-201ENST00000258962 RPRD1AQ96P16 312 aaPredicted RBP17.82■□□□□ 0.44
SRSF1-201ENST00000258962 SERPINB12Q96P63 405 aa17.82■□□□□ 0.44
SRSF1-201ENST00000258962 GORASP1Q9BQQ3 440 aa17.82■□□□□ 0.44
SRSF1-201ENST00000258962 TMEM109Q9BVC6 243 aa17.82■□□□□ 0.44
SRSF1-201ENST00000258962 ARHGEF3Q9NR81 526 aa17.82■□□□□ 0.44
SRSF1-201ENST00000258962 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
SRSF1-201ENST00000258962 ABHD2P08910 425 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 CCNCP24863 283 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 CORO1AP31146 461 aaKnown RBP17.81■□□□□ 0.44
SRSF1-201ENST00000258962 CD68P34810 354 aaPredicted RBP17.81■□□□□ 0.44
SRSF1-201ENST00000258962 HARS2P49590 506 aaKnown RBP17.81■□□□□ 0.44
SRSF1-201ENST00000258962 PARP6Q2NL67 630 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 KRT71Q3SY84 523 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 BBS9Q3SYG4 887 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 PPP1R21Q6ZMI0 780 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 CAND1Q86VP6 1230 aaKnown RBP17.81■□□□□ 0.44
SRSF1-201ENST00000258962 DENND1CQ8IV53 801 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 LGI2Q8N0V4 545 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 FLCNQ8NFG4 579 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 CSGALNACT1Q8TDX6 532 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 DNASE1L2Q92874 299 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 AZIN2Q96A70 460 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 LRRC3BQ96PB8 259 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 VPS18Q9P253 973 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 KLHL8Q9P2G9 620 aaPredicted RBP17.81■□□□□ 0.44
SRSF1-201ENST00000258962 CCL26Q9Y258 94 aa17.81■□□□□ 0.44
SRSF1-201ENST00000258962 F5H5T6 163 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 ZBTB24O43167 697 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 PDGFBP01127 241 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 MYZAPP0CAP1 466 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 IRF1P10914 325 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 MBL2P11226 248 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 SLC11A2P49281 568 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 PAPOLAP51003 745 aaKnown RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 NDST2P52849 883 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 MLF2Q15773 248 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 RFWD3Q6PCD5 774 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 PID1Q7Z2X4 250 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 EPS8L3Q8TE67 593 aaKnown RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 ZNF419Q96HQ0 510 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 PRICKLE1Q96MT3 831 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 TTC25Q96NG3 672 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 VAT1Q99536 393 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 FRMD8Q9BZ67 464 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 TRPV5Q9NQA5 729 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
SRSF1-201ENST00000258962 SMPD4Q9NXE4 827 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 ARHGAP26Q9UNA1 814 aa17.8■□□□□ 0.44
SRSF1-201ENST00000258962 KRBA1A5PL33 1030 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 AVILO75366 819 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 MAGEA3P43357 314 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 GYS2P54840 703 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 GPX6P59796 221 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 IFI35P80217 286 aaPredicted RBP17.79■□□□□ 0.44
SRSF1-201ENST00000258962 SLC7A9P82251 487 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 PRKCQQ04759 706 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 TEX44Q53QW1 395 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 IGDCC3Q8IVU1 814 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 SH2D3CQ8N5H7 860 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 CNTD1Q8N815 330 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 FBXO36Q8NEA4 188 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 SH3RF2Q8TEC5 729 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 HMCESQ96FZ2 354 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 ATP6V1G3Q96LB4 118 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 TEKT5Q96M29 485 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 GBA3Q9H227 469 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 TRHDEQ9UKU6 1024 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 AGO1Q9UL18 857 aaKnown RBP17.79■□□□□ 0.44
SRSF1-201ENST00000258962 TEX264Q9Y6I9 313 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 TRIOO75962 3097 aa17.79■□□□□ 0.44
SRSF1-201ENST00000258962 RASA4BC9J798 803 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 E7EVH7 732 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 MATN3O15232 486 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 RASA4O43374 803 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 JCHAINP01591 159 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 NFKB1P19838 968 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 GRIA1P42261 906 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 ZXDBP98169 803 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 KCTD16Q68DU8 428 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 LRRC49Q8IUZ0 686 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 CFAP52Q8N1V2 620 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 PDCD7Q8N8D1 485 aaKnown RBP17.78■□□□□ 0.44
SRSF1-201ENST00000258962 USP33Q8TEY7 942 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 PYROXD1Q8WU10 500 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 ZFYVE19Q96K21 471 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 AGAP3Q96P47 875 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 IL12RB2Q99665 862 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 TBC1D17Q9HA65 648 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 HEBP1Q9NRV9 189 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 RSPH14Q9UHP6 348 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 CHMP2BQ9UQN3 213 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 ZDBF2Q9HCK1 2354 aa17.78■□□□□ 0.44
SRSF1-201ENST00000258962 NUP210Q8TEM1 1887 aaPredicted RBP17.78■□□□□ 0.44
SRSF1-201ENST00000258962 GOLGA6CA6NDK9 693 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 GREM1O60565 184 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 PEX11BO96011 259 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 GOLGA6DP0CG33 693 aa17.77■□□□□ 0.44
SRSF1-201ENST00000258962 CCNB1P14635 433 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms