RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ZNF778Q96MU6 729 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 HAUS8Q9BT25 410 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SPON2Q9BUD6 331 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SPATA16Q9BXB7 569 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 IL22Q9GZX6 179 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 PCDHAC1Q9H158 963 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 CXCL16Q9H2A7 254 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NT5MQ9NPB1 228 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 DMAP1Q9NPF5 467 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 PIGVQ9NUD9 493 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 DSEQ9UL01 958 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 GNEQ9Y223 722 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 A0A1B0GVG6 124 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 ZNF839A8K0R7 811 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FAM72CH0Y354 149 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MRASO14807 208 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FAM189A1O60320 539 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 TNFAIP8O95379 198 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 POMCP01189 267 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 INCA1Q0VD86 236 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FBXO48Q5FWF7 155 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 PITRM1Q5JRX3 1037 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FAM72AQ5TYM5 149 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 OR52E8Q6IFG1 317 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FAM72DQ6L9T8 149 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NEPROQ6NW34 567 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ESRP1Q6NXG1 681 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 FAM72BQ86X60 149 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NT5DC4Q86YG4 428 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MIB1Q86YT6 1006 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MYO1HQ8N1T3 1032 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ZNF276Q8N554 614 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 PNPLA1Q8N8W4 532 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MAPK15Q8TD08 544 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 IFT43Q96FT9 208 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FCRL3Q96P31 734 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 PHF12Q96QT6 1004 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 RTKNQ9BST9 563 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FTHL17Q9BXU8 183 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 STN1Q9H668 368 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 EML4Q9HC35 981 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 DNAJC28Q9NX36 388 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MOCS1Q9NZB8 636 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 RBPJLQ9UBG7 517 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 AAR2Q9Y312 384 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 SLX4Q8IY92 1834 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 HEATR9A2RTY3 570 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 GOLGA8CPA6NN73 597 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ERI2A8K979 691 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 PSMD12O00232 456 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 HNRNPRO43390 633 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 ANXA9O76027 345 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 TOMM70O94826 608 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 AP2A1O95782 977 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 PFKMP08237 780 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 PIRTP0C851 137 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 CCDC166P0CW27 439 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 CYP2B6P20813 491 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 IL10P22301 178 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 GRIA3P42263 894 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 RPL5P46777 297 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 PSME3P61289 254 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 BEX3Q00994 111 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SNAPC2Q13487 334 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 CCNIQ14094 377 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 INSCQ1MX18 579 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 AGAP9Q5VTM2 703 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ZNF280DQ6N043 979 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 TTC33Q6PID6 262 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 LRRC52Q8N7C0 313 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NAT14Q8WUY8 206 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 LPPQ93052 612 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ZBED3Q96IU2 234 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 CIB1Q99828 191 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 DUSP16Q9BY84 665 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ING2Q9H160 280 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ALG9Q9H6U8 611 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NSMCE4AQ9NXX6 385 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 ABI2Q9NYB9 513 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 WARS2Q9UGM6 360 aaKnown RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 EGFL7Q9UHF1 273 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 FZD10Q9ULW2 581 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 AP4S1Q9Y587 144 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SCN9AQ15858 1988 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 COL5A3P25940 1745 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 COL2A1P02458 1487 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 CCL15-CCL14A0A0B4J2E2 113 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MAGEB16A2A368 324 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 HMX2A2RU54 273 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 MYBPHLA2RUH7 354 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 RRN3P2A6NIE6 340 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SLCO1B7G3V0H7 640 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 DPYSL4O14531 572 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 GNGT2O14610 69 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 NCAM2O15394 837 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 SNNO75324 88 aaPredicted RBP4.81□□□□□ -1.64
USP44-201ENST00000258499 CABYRO75952 493 aa4.81□□□□□ -1.64
USP44-201ENST00000258499 BAIAP3O94812 1187 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms