RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 BHLHE22Q8NFJ8 381 aaPredicted RBP19.25■□□□□ 0.67
SNX4-201ENST00000251775 PPP1R14BQ96C90 147 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 PGBD4Q96DM1 585 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 TNIP3Q96KP6 325 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 HNRNPABQ99729 332 aaKnown RBP19.25■□□□□ 0.67
SNX4-201ENST00000251775 DUSP16Q9BY84 665 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 TCF7L2Q9NQB0 619 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 PIH1D1Q9NWS0 290 aaKnown RBP19.25■□□□□ 0.67
SNX4-201ENST00000251775 COX16Q9P0S2 106 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 VPS28Q9UK41 221 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 IPPQ9Y573 584 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 XPOTO43592 962 aaKnown RBP19.25■□□□□ 0.67
SNX4-201ENST00000251775 TYK2P29597 1187 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 PKNOX1P55347 436 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 CEACAM7Q14002 265 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 ADRM1Q16186 407 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 FAM110CQ1W6H9 321 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 KLHL35Q6PF15 583 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 COLGALT1Q8NBJ5 622 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 FERMT1Q9BQL6 677 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 SYT17Q9BSW7 474 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 CEP41Q9BYV8 373 aa19.25■□□□□ 0.67
SNX4-201ENST00000251775 TSC2P49815 1807 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 RGSL1A5PLK6 1076 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 HACD1B0YJ81 288 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 DAB1O75553 588 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 WARSP23381 471 aaKnown RBP19.24■□□□□ 0.67
SNX4-201ENST00000251775 COG7P83436 770 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 LPIN1Q14693 890 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 SYPL2Q5VXT5 272 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 AGR3Q8TD06 166 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 GOLGA8QA0A0J9YX86 632 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 GOLGA8OA6NCC3 632 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 GOLGA8NF8WBI6 632 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 DPP6P42658 865 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 PSEN2P49810 448 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 CMC1Q7Z7K0 106 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 ZNF554Q86TJ5 538 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 PLD6Q8N2A8 252 aaKnown RBP19.24■□□□□ 0.67
SNX4-201ENST00000251775 RNF148Q8N7C7 305 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 TMEM102Q8N9M5 508 aaPredicted RBP19.24■□□□□ 0.67
SNX4-201ENST00000251775 RNF139Q8WU17 664 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 HSPBAP1Q96EW2 488 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 P2RY11Q96G91 374 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 CNDP1Q96KN2 507 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 KLHL32Q96NJ5 620 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 NPY6RQ99463 290 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 FLRT1Q9NZU1 646 aa19.24■□□□□ 0.67
SNX4-201ENST00000251775 RCOR3Q9P2K3 495 aaPredicted RBP19.24■□□□□ 0.67
SNX4-201ENST00000251775 RSL24D1Q9UHA3 163 aaKnown RBP19.24■□□□□ 0.67
SNX4-201ENST00000251775 RNF103O00237 685 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 HNRNPCP07910 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNX4-201ENST00000251775 ATXN3P54252 364 aaPredicted RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 HFE2Q6ZVN8 426 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 BNIPLQ7Z465 357 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 ERI1Q8IV48 349 aaKnown RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 CHERPQ8IWX8 916 aaKnown RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 TP53INP2Q8IXH6 220 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 TDRD5Q8NAT2 981 aaKnown RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 SNRNP27Q8WVK2 155 aaKnown RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 ARNTL2Q8WYA1 636 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 USP13Q92995 863 aaPredicted RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 NT5C3BQ969T7 300 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 WDR55Q9H6Y2 383 aaPredicted RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 CACNG4Q9UBN1 327 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 RNF11Q9Y3C5 154 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 HEMK1Q9Y5R4 338 aaPredicted RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 SCN4AP35499 1836 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 HAS3O00219 553 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 FAM163BP0C2L3 166 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 NPR3P17342 541 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 RABGGTBP53611 331 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 PPP2R5DQ14738 602 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 CCDC153Q494R4 210 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 KIAA0319Q5VV43 1072 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 TRIM67Q6ZTA4 783 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 RIN3Q8TB24 985 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 FNDC8Q8TC99 324 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 TMIGD2Q96BF3 282 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 RCN3Q96D15 328 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 PARK7Q99497 189 aaKnown RBP19.23■□□□□ 0.67
SNX4-201ENST00000251775 SNX15Q9NRS6 342 aa19.23■□□□□ 0.67
SNX4-201ENST00000251775 GLTPD2A6NH11 291 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 UNCXA6NJT0 531 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 G3V2L1 256 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 M0QYT0 321 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 PTGESO14684 152 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 CFLARO15519 480 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 ZNF23P17027 643 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 ZNF26P17031 533 aaPredicted RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 PSMC3P17980 439 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 PTPN1P18031 435 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 NOS2P35228 1153 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 SESN2P58004 480 aaPredicted RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 SFSWAPQ12872 951 aaKnown RBP19.22■□□□□ 0.67
SNX4-201ENST00000251775 WSCD1Q658N2 575 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 CLEC20AQ6ZU45 233 aa19.22■□□□□ 0.67
SNX4-201ENST00000251775 PSTKQ8IV42 348 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms